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. 2017 Nov 15;18:217. doi: 10.1186/s13059-017-1342-8

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Ecological and expression divergence. a Significant ecological divergence between the two types of samples for each of the four genes, as indicated by the observed I score (I _O) and simulated I scores (I _S). b Expression divergence of the gene AT5G44000. c Left: Modeling of the niche with a high probability (≥ 0.5) of the two types of samples for AT5G44000. Right: Significance results under different permutation strategies (for niches with probability ≥ 0.5; I _O = 0.673, 100 permutations)