TABLE 1:
Input parameters used in simulations, constrained based on experimental measurements.
Parameter | Meaning | Value | Reference |
---|---|---|---|
ξ | Viscous drag coefficient per unit length for longitudinal free diffusion of a MT | ![]() |
Imafuku et al. (1996) |
γ | Effective viscous drag coefficient per attached cross-linker | ![]() |
Pringle et al. (2013) (We use measurements for MAP65 for an order-of-magnitude estimate of the mechanical features of the cross-linker proposed in this model.) |
λ | Maximum linear density of motor attachment to MT | 125 µm-1 | Song and Mandelkow (1993) |
doff | Cytoplasmic dynein unbinding rate under zero load | 0.37 s-1 | Kunwar et al. (2011) |
koff | Kinesin-1 unbinding rate under zero load | 0.35 s-1 | Kunwar et al. (2011) |
Fdd | Cytoplasmic dynein detachment force | 1.74 pN | Kunwar et al. (2011) |
Fdk | Kinesin-1 detachment force | 2.0 pN | Kunwar et al. (2011) |
Fsd | Cytoplasmic dynein stall force | 2.5 pN | Kunwar et al. (2011) |
Fsk | Kinesin-1 stall force | 2.5 pN | Kunwar et al. (2011) |
vbd | Characteristic velocity parameter for cytoplasmic dynein under superstall loads | ![]() |
Kunwar et al. (2011) |
vbk | Characteristic velocity parameter for kinesin-1 under superstall loads | ![]() |
Kunwar et al. (2011) |
vfd | Cytoplasmic dynein velocity under zero load | 3.5 µm | Ahmad et al. (2006) (parameter tuned to match velocity histograms of short axonal MTs in Ahmad et al., 2006). |
vfk | Kinesin-1 velocity under zero load | 1.0 µm | Ahmad et al. (2006) |