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. 2017 Nov 7;28(23):3271–3285. doi: 10.1091/mbc.E17-06-0380

TABLE 1:

Input parameters used in simulations, constrained based on experimental measurements.

Parameter Meaning Value Reference
ξ Viscous drag coefficient per unit length for longitudinal free diffusion of a MT Inline graphic Imafuku et al. (1996)
γ Effective viscous drag coefficient per attached cross-linker Inline graphic Pringle et al. (2013) (We use measurements for MAP65 for an order-of-magnitude estimate of the mechanical features of the cross-linker proposed in this model.)
λ Maximum linear density of motor attachment to MT 125 µm-1 Song and Mandelkow (1993)
doff Cytoplasmic dynein unbinding rate under zero load 0.37 s-1 Kunwar et al. (2011)
koff Kinesin-1 unbinding rate under zero load 0.35 s-1 Kunwar et al. (2011)
Fdd Cytoplasmic dynein detachment force 1.74 pN Kunwar et al. (2011)
Fdk Kinesin-1 detachment force 2.0 pN Kunwar et al. (2011)
Fsd Cytoplasmic dynein stall force 2.5 pN Kunwar et al. (2011)
Fsk Kinesin-1 stall force 2.5 pN Kunwar et al. (2011)
vbd Characteristic velocity parameter for cytoplasmic ­dynein under superstall loads Inline graphic Kunwar et al. (2011)
vbk Characteristic velocity parameter for kinesin-1 under superstall loads Inline graphic Kunwar et al. (2011)
vfd Cytoplasmic dynein velocity under zero load 3.5 µm Ahmad et al. (2006) (parameter tuned to match velocity histograms of short axonal MTs in Ahmad et al., 2006).
vfk Kinesin-1 velocity under zero load 1.0 µm Ahmad et al. (2006)