Table II.
Validated Ancestry Informative Marker Single Nucleotide Polymorphisms to Determine Ancestry Assignment of Prostate Cancer Cell Lines
| dbSNP ID | Chromosome Number | Nucleotide Change | Allele 1 frequency | ||
|---|---|---|---|---|---|
| EUR | AFR | ||||
| 1 | rs4891825 | 18 | G/A | 0.89 | 0.09 |
| 2 | rs9530435 | 13 | T/C | 0.79 | 0.07 |
| 3 | rs1040045 | 6 | T/C | 0.73 | 0.10 |
| 4 | rs7554936 | 1 | T/C | 0.34 | 0.99 |
| 5 | rs772262 | 12 | G/A | 0.06 | 0.87 |
| 6 | rs3784230 | 14 | T/C | 0.58 | 0.00 |
| 7 | rs260690 | 2 | C/A | 0.91 | 0.36 |
| 8 | rs10007810 | 4 | G/A | 0.25 | 0.96 |
| 9 | rs7657799 | 4 | T/G | 0.05 | 0.86 |
| 10 | rs6548616 | 3 | T/C | 0.25 | 0.96 |
| 11 | rs4908343 | 1 | G/A | 0.82 | 0.04 |
| 12 | rs11652805 | 17 | T/C | 0.14 | 0.98 |
| 13 | rs9522149 | 13 | T/C | 0.76 | 0.03 |
| 14 | rs10108270 | 8 | C/A | 0.35 | 0.97 |
| 15 | rs6451722 | 5 | G/A | 0.24 | 0.90 |
| 16 | rs9319336 | 13 | T/C | 0.05 | 0.11 |
| 17 | rs870347 | 5 | T/G | 0.95 | 0.95 |
| 18 | rs7803075 | 7 | G/A | 0.29 | 1.00 |
| 19 | rs2416791 | 12 | G/A | 0.08 | 0.94 |
| 20 | rs6422347 | 5 | G/A | 0.10 | 0.89 |
| 21 | rs7997709 | 13 | T/C | 0.06 | 0.23 |
| 22 | rs 731257 | 7 | G/A | 0.09 | 0.02 |
| 23 | rs 4918842 | 10 | T/C | 0.15 | 0.09 |
| 24 | rs10496971 | 2 | T/G | 0.09 | 0.06 |
| 25 | rs12629908 | 3 | G/A | 0.05 | 0.16 |
| 26 | rs3907047 | 20 | C/T | 0.06 | 0.00 |
| 27 | rs1513181 | 3 | C/T | 0.14 | 0.21 |
| 28 | rs1471939 | 8 | C/T | 0.17 | 0.32 |
| 29 | rs2125345 | 17 | A/G | 0.32 | 0.99 |
dbSNP, NCBI Single Nucleotide Polymorphism database; EUR, European; AFR, West African