Table 4.
List of significantly (Benjamini-Hochberg adjusted P-value cutoff of 0.2) differentially expressed transcripts between inflamed and non-inflamed samples.
| Transcript ID |
Gene Symbol |
Description |
LogFC |
FDR |
| TC17001649.hg.1 | PRAC1 | prostate cancer susceptibility candidate | 3.8149 | 0.00012235 |
| TC15000405.hg.1 | GLDN | gliomedin | 1.2632 | 0.00830502 |
| TC15001837.hg.1 | ANPEP | alanyl (membrane) aminopeptidase | -2.2182 | 0.00830502 |
| TC17001651.hg.1 | HOXB13 | homeobox B13 | 1.4778 | 0.00830502 |
| TC09002921.hg.1 | ST6GALNAC6 | ST6 (α-N-acetyl-neuraminyl-2,3-β-galactosyl-1,3)-N-acetylgalactosaminide α-2,6-sialyltransferase 6 | 1.8220 | 0.01424986 |
| TC13000741.hg.1 | KCTD12 | potassium channel tetramerisation domain containing 12 | 2.3843 | 0.01424986 |
| TC21000989.hg.1 | B3GALT5 | UDP-Gal:βGlcNAc β 1,3 galactosyltransferase, polypeptide 5 | 1.5520 | 0.01514616 |
| TC08001294.hg.1 | CPA6 | carboxypeptidase A6 | 1.7881 | 0.01576238 |
| TC10002938.hg.1 | C10orf116 | chromosome 10 open reading frame 116 adipogenesis regulatory factor | -0.6264 | 0.01576238 |
| TC12001901.hg.1 | NT5DC3 | 5-nucleotidase domain containing 3 | 1.0920 | 0.02110773 |
| TC21000464.hg.1 | C21orf88 | chromosome 21 open reading frame 88 | 2.5530 | 0.02342417 |
| TC01002752.hg.1 | INSL5 | insulin-like 5 | 2.8999 | 0.02794573 |
| TC04001471.hg.1 | PITX2 | paired-like homeodomain 2 | -1.5796 | 0.02842635 |
| TC11000211.hg.1 | SPON1 | spondin 1, extracellular matrix protein | 1.4101 | 0.02842635 |
| TC04001410.hg.1 | ADH1B | alcohol dehydrogenase 1B (class I), β polypeptide | -0.8644 | 0.03071734 |
| TC04001409.hg.1 | ADH1A | alcohol dehydrogenase 1A (class I), α polypeptide | -0.9172 | 0.03323028 |
| TC07002589.hg.1 | LINC-PINT | long intergenic non-protein coding RNA,p53 induced transcript | 0.5743 | 0.03323028 |
| TC03003022.hg.1 | MYH15 | myosin, heavy chain 15 | 1.3573 | 0.03857138 |
| TC17002262.hg.1 | B4GALNT2 | β-1,4-N-acetyl-galactosaminyl transferase 2 (B4GALNT2) | -1.7076 | 0.03941676 |
| TC04001411.hg.1 | ADH1C | alcohol dehydrogenase 1C (class I), gamma polypeptide | -1.0960 | 0.03993123 |
| TC06001299.hg.1 | KIF13A | kinesin family member 13A | 0.5311 | 0.04292623 |
| TC05002796.hg.1 | FLJ00157 | Homo sapiens mRNA for FLJ00157 protein | -1.8563 | 0.04372244 |
| TC20000349.hg.1 | WFDC2 | WAP 4-disulfide core domain 2 | 1.0036 | 0.04455290 |
| TC0Y000341.hg.1 | *** | *** no description*** | 0.9024 | 0.05041901 |
| TC17000638.hg.1 | B4GALNT2 | β-1,4-N-acetyl-galactosaminyl transferase 2 | -1.5293 | 0.05129017 |
| TC01000723.hg.1 | ROR1 | receptor tyrosine kinase-like orphan receptor 1 | 0.5806 | 0.05660819 |
| TC0Y000275.hg.1 | *** | *** no description*** | 1.4056 | 0.05660819 |
| TC01003752.hg.1 | NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | 0.6628 | 0.05878908 |
| TC03003359.hg.1 | GXYLT2 | glucoside xylosyltransferase 2 | -0.6263 | 0.06076798 |
| TC12001155.hg.1 | LPCAT3 | lysophosphatidylcholine acyltransferase 3 | -0.5652 | 0.07070229 |
| TC06003630.hg.1 | DAAM2 | disheveled associated activator of morphogenesis 2 | -0.8143 | 0.07543406 |
| TC05001095.hg.1 | PP7080 | uncharacterized LOC25845 | -1.4284 | 0.07636208 |
| TC04000168.hg.1 | GBA3 | glucosidase, β, acid 3 | -1.4168 | 0.07717089 |
| TC01004068.hg.1 | MIR3916 | microRNA 3916 | 0.5370 | 0.08218670 |
| TC06004132.hg.1 | MOCS1 | molybdenum cofactor synthesis 1 | -0.5321 | 0.08218670 |
| TC10000593.hg.1 | CDHR1 | cadherin-related family member 1 | 0.8484 | 0.08218670 |
| TC12000203.hg.1 | PTPRO | protein tyrosine phosphatase, receptor type, O | 0.8631 | 0.08218670 |
| TC03000131.hg.1 | RARB | retinoic acid receptor, β | -0.7255 | 0.08301883 |
| TC06000926.hg.1 | RFX6 | regulatory factor X, 6 | 0.5280 | 0.08301883 |
| TC15002698.hg.1 | *** | *** no description*** | -0.4019 | 0.08318291 |
| TC20001482.hg.1 | LINC00261 | long intergenic non-protein coding RNA 261 | 1.4472 | 0.08677308 |
| TC01002882.hg.1 | GCLM | glutamate-cysteine ligase, modifier subunit | -0.7496 | 0.09208306 |
| TC07000931.hg.1 | TMEM139 | transmembrane protein 139 | -0.6448 | 0.09320002 |
| TC02002479.hg.1 | GCG | glucagon | 2.1546 | 0.0972245 |
| TC05002797.hg.1 | SLC9A3 | solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 | -2.1590 | 0.09722454 |
| TC16000522.hg.1 | CA7 | carbonic anhydrase VII | 1.4832 | 0.09722453 |
| TC21000363.hg.1 | CLDN8 | claudin 8 | 2.8735 | 0.09722453 |
| TC06000173.hg.1 | HIST1H2AE | histone cluster 1, H2ae | -0.5886 | 0.09832936 |
| TC10001089.hg.1 | NEBL | nebulette | 0.5596 | 0.10402139 |
| TC14001475.hg.1 | LINC00341 | long intergenic non-protein coding RNA 341 | 0.5282 | 0.10402139 |
| TC01005141.hg.1 | *** | *** no description*** | 0.9118 | 0.10531854 |
| TC07003096.hg.1 | LHFPL3 | lipoma HMGIC fusion partner-like 3 | -1.6865 | 0.10531854 |
| TC12000329.hg.1 | ANO6 | anoctamin 6 | 1.6249 | 0.10531854 |
| TC21000729.hg.1 | C21orf88 | chromosome 21 open reading frame 88 | 0.9782 | 0.10531854 |
| TC04001299.hg.1 | CDKL2 | cyclin-dependent kinase-like 2 (CDC2-related kinase) | 0.6730 | 0.10721497 |
| TC16000969.hg.1 | CACNG3 | calcium channel, voltage-dependent, gamma subunit 3 | 0.5635 | 0.10608053 |
| TC16002090.hg.1 | CHST5 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 | 1.6146 | 0.12788495 |
| TC20000726.hg.1 | APMAP | adipocyte plasma membrane associated protein | -0.5785 | 0.12831669 |
| TC05001096.hg.1 | SLC9A3 | solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 | -1.7126 | 0.12952132 |
| TC15000406.hg.1 | GLDN | gliomedin | 0.5266 | 0.12952132 |
| TC17001568.hg.1 | PYY | peptide YY | 1.1306 | 0.12987431 |
| TC17002257.hg.1 | PRAC2 | prostate cancer susceptibility candidate 2 | 0.5566 | 0.14674671 |
| TC17000317.hg.1 | PYY2 | peptide YY, 2 (pseudogene) | 0.5121 | 0.15335219 |
| TC04000895.hg.1 | *** | *** no description*** | -0.9907 | 0.15383132 |
| TC16002091.hg.1 | TMEM231 | transmembrane protein 231 | 0.4550 | 0.15516000 |
| TC04002356.hg.1 | *** | *** no description*** | -0.9819 | 0.17219695 |
| TC05003353.hg.1 | RANBP17 | RAN binding protein 17 | 0.5107 | 0.17219695 |
| TC16001964.hg.1 | TMEM231 | transmembrane protein 231 | 1.1312 | 0.18186527 |
| TC20000698.hg.1 | FOXA2 | forkhead box A2 | 0.5397 | 0.18186527 |
| TC02001391.hg.1 | B3GNT7 | UDP-GlcNAc:βGal β-1,3-N-acetylglucosaminyltransferase 7 | 1.1406 | 0.18308688 |
| TC07002442.hg.1 | CROT | carnitine O-octanoyltransferase | -0.7765 | 0.18626684 |
| TC09001528.hg.1 | RP11–388N2.1 | putative novel transcript | 0.5826 | 0.18626684 |
| TC03001525.hg.1 | PRICKLE2 | prickle homolog 2 (Drosophila) | 0.3886 | 0.19988562 |