Table 3.
List of SNPs for selected yield components identified in this study and comparison of their locations to QTL mapped elsewhere
N | Trait | SNP | Chr | Position (cM) | Sukumuran et al. (2015) | Zanke et al. (2015) | Jaiswal et al. (2016) | Guo et al. (2017) | Quarrie et al. (2005), ranges in cM |
---|---|---|---|---|---|---|---|---|---|
1 | NFS | AX-94869415 | 1A | 45.65 | 39.5–47.5 | ||||
2 | NFS | AX-94948615 | 1A | 78.56 | |||||
3 | NFS | AX-95628967 | 1B | 45.57 | |||||
4 | NFS | AX-94954240 | 1B | 61.49 | |||||
5 | NFS | AX-94443802 | 1B | 134.89 | |||||
6 | NFS | AX-94678469 | 1D | 48.90 | |||||
7 | NFS | AX-95131442 | 2B | 60.89 | |||||
8 | NFS | AX-94527258 | 3B | 7.98 | |||||
9 | NFS | AX-94855940 | 3B | 59.75 | |||||
10 | NFS | AX-94592612 | 4B | 39.00 | 29.7–91.2 | ||||
11 | NFS | AX-94461626 | 4B | 66.40 | 29.7–91.2 | ||||
12 | NFS | AX-95130967 | 5B | 92.30 | |||||
13 | NFS | AX-95083697 | 5D | 27.86 | |||||
14 | NFS | AX-94738897 | 5D | 169.57 | 154.6–175.6 | ||||
15 | NFS | AX-94537121 | 6A | 90.86 | |||||
16 | NFS | AX-94497652 | 6B | 0.00 | |||||
17 | NFS | AX-95629976 | 6B | 24.90 | |||||
18 | NFS | AX-95075432 | 7A | 10.48 | 0–22.9 | ||||
19 | NFS | AX-94396050 | 7A | 65.60 | |||||
20 | NKS | AX-94653665 | 1A | 46.79 | 47.0 | 39.5–47.5 | |||
21 | NKS | AX-94838752 | 3B | 56.89 | |||||
22 | NKS | AX-94480370 | 5B | 144.10 | |||||
23 | NKS | AX-94498253 | 6A | 2.72 | 5.7 | ||||
24 | PH | AX-94490921 | 1A | 44.51 | |||||
25 | PH | AX-94532960 | 1B | 45.57 | |||||
26 | PH | AX-95175232 | 2A | 58.66 | |||||
27 | PH | AX-95633254 | 2B | 161.40 | |||||
28 | PH | AX-94735883 | 2D | 28.18 | |||||
29 | PH | AX-94523972 | 3B | 59.17 | |||||
30 | PH | AX-95009583 | 4A | 75.10 | |||||
31 | PH | AX-94592612 | 4B | 39.00 | |||||
32 | PH | AX-95117055 | 4B | 50.38 | |||||
33 | PH | AX-95120604 | 5B | 38.20 | |||||
34 | PH | AX-95012377 | 6B | 46.69 | 42.0 | ||||
35 | PH | AX-94437052 | 7D | 0.57 | |||||
36 | PH | AX-94539237 | 7D | 150.63 | |||||
37 | PL | AX-94490921 | 1A | 44.51 | |||||
38 | PL | AX-94532960 | 1B | 45.57 | |||||
39 | PL | AX-94678469 | 1D | 48.90 | 49.0 | ||||
40 | PL | AX-94443352 | 2D | 20.69 | |||||
41 | PL | AX-95117055 | 4B | 50.38 | |||||
42 | PL | AX-95659250 | 5A | 9.09 | |||||
43 | PL | AX-94437052 | 7D | 0.57 | |||||
44 | PL | AX-94539237 | 7D | 150.63 | |||||
45 | SL | AX-94653665 | 1A | 46.79 | 47.0 | ||||
46 | TKW | AX-95630586 | 1D | 11.02 | 12.1 | 7.5–29.0 | |||
47 | TKW | AX-94494298 | 3A | 63.91 | |||||
48 | TKW | AX-95630238 | 3A | 119.14 | 97.7–152.8 | ||||
49 | TKW | AX-94523972 | 3B | 59.17 | 61.0 | ||||
50 | TKW | AX-94507582 | 4B | 93.60 | 94.2–139.2 | ||||
51 | TKW | AX-94480370 | 5B | 144.10 | |||||
52 | TKW | AX-94486485 | 5D | 117.24 |