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. 2017 Nov 16;12(11):e0187920. doi: 10.1371/journal.pone.0187920

Fig 7. Heat map of relative synonymous codon usage (RSCU) for start, middle, and end 30 CDS (coding sequence) codons ending in pyrimidine (C and T) from different soybean gene groups.

Fig 7

The groups are formed by top 40 and 500 ranked up- (U), down-regulated (D), and stable-genes (S) to hypoxia, and genome (G). Asp, Cys, Tyr, His, Phe, and Asn are coding by 2-fold degenerate pyrimidine ending codons. Heat map of RSCU for all 59 synonymous codons including for whole CDS extension is provided in Fig E in S1 Supporting Information.