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. 2017 Nov 6;13(11):e1005827. doi: 10.1371/journal.pcbi.1005827

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© 2017 Sloma, Mathews

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 4 — Prediction of canonical base pairs by predicting a conserved structure using multiple homologous sequences for (A) an MVE virus nuclease resistant RNA [53], (B) a D. radiodurans SRP hairpin domain [54], and (C) a O. sativa Twister ribozyme [55]. Prediction accuracy is shown for structures composed of highly probable pairs using information from a single sequence (blue) or a TurboFold calculation with 10 sequences (red). Also shown is prediction accuracy using evolutionary couplings from the plmc program [16] (green).