Table 1.
Assembly and annotation statistics of transcriptomes.
| Clean reads | |
|---|---|
| MJ0_R1 | 45,012,356 |
| MJ0_R2 | 46,976,300 |
| MJ0_R3 | 42,120,756 |
| MJ6_R1 | 41,091,182 |
| MJ6_R2 | 42,796,854 |
| MJ6_R3 | 47,615,470 |
| MJ24_R1 | 46,811,300 |
| MJ24_R2 | 43,596,792 |
| MJ24_R3 | 46,268,400 |
| Trinity Assembly | |
| Number of transcripts | 226,524 |
| Mean length of transcripts | 857 |
| N50 of transcripts | 1413 |
| Number of unigenes | 127,833 |
| Mean length of unigenes | 638 |
| N50 of unigenes | 1081 |
| Annotation | |
| NR | 54,508 |
| NT | 37,653 |
| KO | 22,904 |
| SwissProt | 48,114 |
| PFAM | 44,372 |
| GO | 45,232 |
| KOG | 27,321 |
| Annotated in at least one Database | 74,997 |
MJ0, MJ6, and MJ24 indicate the seedlings treated by MeJA for 0 h, 6 h, and 24 h; R1, R2, and R3 indicate the three biological replicates of each treated line.