TABLE 1.
Deduced functions of ORFs within or near the missing 8,988-bp fragment sequence
| Gene name | Position in plasmid P3/no. of amino acids | Homologous protein | Source | UniProtKB accession no. | Identity (%) |
|---|---|---|---|---|---|
| orf1 | 33174–33938/254 | Putative ATP-binding protein | Mycobacterium tuberculosis H37Rv | Q50701.1 | 29 |
| orf2 | 34061–35419/452 | Acetylglutamate kinase | Mycobacterium leprae TN | Q9CC13.2 | 32 |
| tra1 | 35901–37517/538 | Putative transposase y4qJ | Sinorhizobium fredii NGR234 | P55631.1 | 26 |
| tmoA | 38683–39894/403 | Pyrimidine monooxygenase RutA | Agrobacterium fabrum strain C58 | P58759.1 | 32 |
| tmoB | 40418–40921/167 | FMN reductase (NADH) NtaB | Aminobacter aminovorans | P54990.2 | 37 |
| orf3 | 41339–41998/199 | Biotin synthase | Rhodopseudomonas palustris CGA009 | Q6N859.1 | 30 |
| orf4 | 41973–42362/129 | Transmembrane channel-like protein 1 | Mus musculus | Q8R4P5.1 | 55 |
| tra2 | 42721–45750/1009 | Transposase for transposon Tn3926 | Escherichia coli | P13694.1 | 23 |
| orf5 | 45747–46340/197 | Serine recombinase gin | Escherichia phage D108 | Q38199.2 | 49 |
| tmoC | 48050–49597/515 | Benzaldehyde dehydrogenase | Pseudomonas putida | P43503.1 | 48 |
| tra3 | 49702–50133/143 | Transposase for IS200 | Salmonella enterica | P59696.1 | 43 |