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. Author manuscript; available in PMC: 2018 Nov 16.
Published in final edited form as: Cell. 2017 Oct 12;171(5):1057–1071.e11. doi: 10.1016/j.cell.2017.09.029
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Fixable viability dye eFluor780 eBioscience Cat# 65-0865-14
Anti-mouse IL-17A Monoclonal Antibody (eBio17B7), PE eBioscience Cat# 12-7177-81
Anti-mouse CD4 Monoclonal Antibody (RM4-5), APC Tonbo Biosciences Cat# 20-0042-U100
Anti-mouse TCRβ Monoclonal Antibody (H57-597), Pacific Blue Biolegend Cat# 109226
Fixable viability dye eFluor780 eBioscience Cat# 65-0865-14
Anti-mouse LDLR Polyclonal Antibody, PE Sino Biological Cat# 50305-R032-P-25
Anti-mouse CD4 Monoclonal Antibody (RM4-5), APC Tonbo Biosciences Cat# 20-0042-U100
Anti-mouse TCRβ Monoclonal Antibody (H57-597), Pacific Blue Biolegend Cat# 109226
Anti-mouse F4/80 Monoclonal Antibody (BM8.1), APC Tonbo Biosciences Cat# 20-4801-U100
Anti-Phospho-S6 Ribosomal Protein (Ser240/244) Monoclonal Antibody (D68F8) Cell Signaling Technologies Cat# 5364S
Anti-Phospho-p70 S6 Kinase (Thr389) Monoclonal Antibody (108D2) Cell Signaling Technologies Cat# 9234S
Anti-p70 S6 Kinase Monoclonal Antibody (49D7) Cell Signaling Technologies Cat# 9234T
Anti-mouse Cytochrome C Monoclonal Antibody (6H2.4), Alexa488 Biolegend Cat# 612308
Anti-mouse NLRP3/NALP3 Monoclonal Antibody (Cryo-2) Adipogen Cat# AG-20B-0014-C100
Anti-mouse Asc Polyclonal Antibody (AL177) Adipogen Cat# AG-25B-0006-C100
Anti-mouse Caspase-1 Polyclonal Antibody (M-20) Santa Cruz Biotechnology Cat# sc-514
Anti-mouse Tomm20 Polyclonal Antibody One World Lab Cat# C16678
Anti-mouse α-Tubulin Monoclonal Antibody (DM1A), Biotin eBioscience Cat# 13-4502-80
Bacterial and Virus Strains
Listeria monocytogenes A gift from D. Portnoy N/A
Biological Samples
Chemicals, Peptides, and Recombinant Proteins
Recombinant murine IL-β Peprotech Cat# 211-11B
MitoSOX Red Mitochondrial Superoxide Indicator ThermoFisher Scientific Cat# M36008
MitoTracker Deep Red FM ThermoFisher Scientific Cat# M22426
MitoTracker Green FM ThermoFisher Scientific Cat# M7514
Tetramethylrhodamine, Methyl Ester, Perchlorate (TMRM) ThermoFisher Scientific Cat# T668
MitoTEMPO Millipore Sigma Cat# SML0737
DAPI, FluoroPure grade ThermoFisher Scientific Cat# D21490
ATP InvivoGen Cat# TLRL-ATP
Nigericin sodium salt Millipore Sigma Cat# N7143
Poly(deoxyadenylic-thymidylic)(dA:dT) acid sodium salt Millipore Sigma Cat# P0883-10UN
FlaTOX von Moltke et al., 2012 (a gift from R. Vance) N/A
Imject Alum Adjuvant ThermoFisher Scientific Cat# 77161
Lipopolysaccharide from E. coli O111:B4 Millipore Sigma Cat# L4391
25-hydroxycholesterol Avanti Polar Lipids Cat# 700019P
Cholesterol-Water Soluble Millipore Sigma Cat# C4951
Methyl-β-cyclodextrin Millipore Sigma Cat# C4555
Rapamycin LC Laboratories Cat# R-5000
Cytochalasin D Millipore Sigma Cat# C8273
Filipin III from Streptomyces filipinensis Millipore Sigma Cat# F4767
Digitonin Millipore Sigma Cat# D141
Ethidium bromide Millipore Sigma Cat# E1510
2′,3′-Dideoxycytidine (ddC) Millipore Sigma Cat# D5782
GW3965 hydrochloride Millipore Sigma Cat# G6295
Lipoprotein, High Density Lee Biosolutions Cat# 361-10-0.01
Brain Heart Infusion Agar, Deep Fill, 15×100mm plate R Hardy Diagnostics Cat # W15
Critical Commercial Assays
Seahorse XF Cell Mitochondria Stress Test Kit Seahorse Biosciences/Agilent Cat# 103015-100
MACS Mitochondrial Isolation Kit Miltenyi Biotec Cat# 130-096-946
Amplex Red Cholesterol Assay Kit ThermoFisher Scientific Cat# A12216
Deposited Data
Experimental Models: Cell Lines
Human Embryonic Kidney Cells (HEK293T) ATCC Cat# CRL-3216
Platinum-E (Plat-E) Retroviral Packaging Cell Line A gift some S. Schwab N/A
Experimental Models: Organisms/Strains
Mouse: C57BL/6J Jackson Laboratories Stock No: 000664
Mouse: B6-Ly5.1/Cr Strain ID: B6.SJL- PtprcaPepcb/BoyCrCrl NCI at Charles River Stock No: 564
Mouse: Ch25h−/− Strain ID: B6.129S6- Ch25htm1Rus/J Jackson Laboratories Stock No: 016263
Mouse: Aim2−/− Strain ID: B6.129P2- Aim2Gt(CSG445)Byg/J Jackson Laboratories Stock No: 013144
Mouse: Asc−/− Strain ID: B6.129-Pycardtm1Vmd Genentech N/A
Mouse: Nlrp3−/− Strain ID: B6.129S6-Nlrp3tm1Bhk/J Jackson Laboratories Stock No: 021302
Mouse: Casp1/11−/− Strain ID: B6N.129S2- Casp1tm1Flv/J Jackson Laboratories Stock No: 016621
Mouse: Nr1h3−/− Strain ID: 129-Nr1h3tm1Djm/J Jackson Laboratories Stock No: 013762
Mouse: Nr1h2−/− Strain ID: B6.129S-Nr1h2tm1Djm/J Jackson Laboratories Stock No: 014635
Mouse: Nlrc4−/− Strain ID: B6N-Nlrc4tm1Vmd Genentech N/A
Oligonucleotides
RT-PCR primers for Ch25h
Fwd: 5′-GCGACGCTACAAGATCCA-3′
Rev: 5′-CACGAACACCAGGTGCTG-3′
This paper N/A
RT-PCR primers for Hmgcs1
Fwd: 5′-GGAAGCCTTTGGGGACGTTA-3′
Rev: 5′-ACACTCCAACCCTCTTCCCT-3′
This paper N/A
RT-PCR primers for Lss
Fwd: 5′-GGGCCCTGAATGGAGTAACC-3′
Rev: 5′-GTCCTCGATGTGCAAGCCC-3′
This paper N/A
RT-PCR primers for Dhcr24
Fwd: 5′-GGACATCATCCCTTTCGGCA-3′
Rev: 5′-TGGGGTAGACGTGGATGTCA-3′
This paper N/A
RT-PCR primers for Sqle
Fwd: 5′-AGTGAACAAACGAGGCGTCC-3′
Rev: 5′-AGCAAGCTTTTCGGAGCTGA-3′
This paper N/A
RT-PCR primers for Tert nuclear DNA West et al., 2015 N/A
RT-PCR primers for mtDNA D loop West et al., 2015 N/A
Recombinant DNA
MSCV-IRES-Thy1.1 Addgene Plasmid ID: 17442
Software and Algorithms
FlowJo v10 FlowJo, LLC N/A
Prism 6 GraphPad Software N/A
Other