REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Fixable viability dye eFluor780 | eBioscience | Cat# 65-0865-14 |
Anti-mouse IL-17A Monoclonal Antibody (eBio17B7), PE | eBioscience | Cat# 12-7177-81 |
Anti-mouse CD4 Monoclonal Antibody (RM4-5), APC | Tonbo Biosciences | Cat# 20-0042-U100 |
Anti-mouse TCRβ Monoclonal Antibody (H57-597), Pacific Blue | Biolegend | Cat# 109226 |
Fixable viability dye eFluor780 | eBioscience | Cat# 65-0865-14 |
Anti-mouse LDLR Polyclonal Antibody, PE | Sino Biological | Cat# 50305-R032-P-25 |
Anti-mouse CD4 Monoclonal Antibody (RM4-5), APC | Tonbo Biosciences | Cat# 20-0042-U100 |
Anti-mouse TCRβ Monoclonal Antibody (H57-597), Pacific Blue | Biolegend | Cat# 109226 |
Anti-mouse F4/80 Monoclonal Antibody (BM8.1), APC | Tonbo Biosciences | Cat# 20-4801-U100 |
Anti-Phospho-S6 Ribosomal Protein (Ser240/244) Monoclonal Antibody (D68F8) | Cell Signaling Technologies | Cat# 5364S |
Anti-Phospho-p70 S6 Kinase (Thr389) Monoclonal Antibody (108D2) | Cell Signaling Technologies | Cat# 9234S |
Anti-p70 S6 Kinase Monoclonal Antibody (49D7) | Cell Signaling Technologies | Cat# 9234T |
Anti-mouse Cytochrome C Monoclonal Antibody (6H2.4), Alexa488 | Biolegend | Cat# 612308 |
Anti-mouse NLRP3/NALP3 Monoclonal Antibody (Cryo-2) | Adipogen | Cat# AG-20B-0014-C100 |
Anti-mouse Asc Polyclonal Antibody (AL177) | Adipogen | Cat# AG-25B-0006-C100 |
Anti-mouse Caspase-1 Polyclonal Antibody (M-20) | Santa Cruz Biotechnology | Cat# sc-514 |
Anti-mouse Tomm20 Polyclonal Antibody | One World Lab | Cat# C16678 |
Anti-mouse α-Tubulin Monoclonal Antibody (DM1A), Biotin | eBioscience | Cat# 13-4502-80 |
Bacterial and Virus Strains | ||
Listeria monocytogenes | A gift from D. Portnoy | N/A |
Biological Samples | ||
Chemicals, Peptides, and Recombinant Proteins | ||
Recombinant murine IL-β | Peprotech | Cat# 211-11B |
MitoSOX Red Mitochondrial Superoxide Indicator | ThermoFisher Scientific | Cat# M36008 |
MitoTracker Deep Red FM | ThermoFisher Scientific | Cat# M22426 |
MitoTracker Green FM | ThermoFisher Scientific | Cat# M7514 |
Tetramethylrhodamine, Methyl Ester, Perchlorate (TMRM) | ThermoFisher Scientific | Cat# T668 |
MitoTEMPO | Millipore Sigma | Cat# SML0737 |
DAPI, FluoroPure grade | ThermoFisher Scientific | Cat# D21490 |
ATP | InvivoGen | Cat# TLRL-ATP |
Nigericin sodium salt | Millipore Sigma | Cat# N7143 |
Poly(deoxyadenylic-thymidylic)(dA:dT) acid sodium salt | Millipore Sigma | Cat# P0883-10UN |
FlaTOX | von Moltke et al., 2012 (a gift from R. Vance) | N/A |
Imject Alum Adjuvant | ThermoFisher Scientific | Cat# 77161 |
Lipopolysaccharide from E. coli O111:B4 | Millipore Sigma | Cat# L4391 |
25-hydroxycholesterol | Avanti Polar Lipids | Cat# 700019P |
Cholesterol-Water Soluble | Millipore Sigma | Cat# C4951 |
Methyl-β-cyclodextrin | Millipore Sigma | Cat# C4555 |
Rapamycin | LC Laboratories | Cat# R-5000 |
Cytochalasin D | Millipore Sigma | Cat# C8273 |
Filipin III from Streptomyces filipinensis | Millipore Sigma | Cat# F4767 |
Digitonin | Millipore Sigma | Cat# D141 |
Ethidium bromide | Millipore Sigma | Cat# E1510 |
2′,3′-Dideoxycytidine (ddC) | Millipore Sigma | Cat# D5782 |
GW3965 hydrochloride | Millipore Sigma | Cat# G6295 |
Lipoprotein, High Density | Lee Biosolutions | Cat# 361-10-0.01 |
Brain Heart Infusion Agar, Deep Fill, 15×100mm plate R | Hardy Diagnostics | Cat # W15 |
Critical Commercial Assays | ||
Seahorse XF Cell Mitochondria Stress Test Kit | Seahorse Biosciences/Agilent | Cat# 103015-100 |
MACS Mitochondrial Isolation Kit | Miltenyi Biotec | Cat# 130-096-946 |
Amplex Red Cholesterol Assay Kit | ThermoFisher Scientific | Cat# A12216 |
Deposited Data | ||
Experimental Models: Cell Lines | ||
Human Embryonic Kidney Cells (HEK293T) | ATCC | Cat# CRL-3216 |
Platinum-E (Plat-E) Retroviral Packaging Cell Line | A gift some S. Schwab | N/A |
Experimental Models: Organisms/Strains | ||
Mouse: C57BL/6J | Jackson Laboratories | Stock No: 000664 |
Mouse: B6-Ly5.1/Cr Strain ID: B6.SJL- PtprcaPepcb/BoyCrCrl | NCI at Charles River | Stock No: 564 |
Mouse: Ch25h−/− Strain ID: B6.129S6- Ch25htm1Rus/J | Jackson Laboratories | Stock No: 016263 |
Mouse: Aim2−/− Strain ID: B6.129P2- Aim2Gt(CSG445)Byg/J | Jackson Laboratories | Stock No: 013144 |
Mouse: Asc−/− Strain ID: B6.129-Pycardtm1Vmd | Genentech | N/A |
Mouse: Nlrp3−/− Strain ID: B6.129S6-Nlrp3tm1Bhk/J | Jackson Laboratories | Stock No: 021302 |
Mouse: Casp1/11−/− Strain ID: B6N.129S2- Casp1tm1Flv/J | Jackson Laboratories | Stock No: 016621 |
Mouse: Nr1h3−/− Strain ID: 129-Nr1h3tm1Djm/J | Jackson Laboratories | Stock No: 013762 |
Mouse: Nr1h2−/− Strain ID: B6.129S-Nr1h2tm1Djm/J | Jackson Laboratories | Stock No: 014635 |
Mouse: Nlrc4−/− Strain ID: B6N-Nlrc4tm1Vmd | Genentech | N/A |
Oligonucleotides | ||
RT-PCR primers for Ch25h Fwd: 5′-GCGACGCTACAAGATCCA-3′ Rev: 5′-CACGAACACCAGGTGCTG-3′ |
This paper | N/A |
RT-PCR primers for Hmgcs1 Fwd: 5′-GGAAGCCTTTGGGGACGTTA-3′ Rev: 5′-ACACTCCAACCCTCTTCCCT-3′ |
This paper | N/A |
RT-PCR primers for Lss Fwd: 5′-GGGCCCTGAATGGAGTAACC-3′ Rev: 5′-GTCCTCGATGTGCAAGCCC-3′ |
This paper | N/A |
RT-PCR primers for Dhcr24 Fwd: 5′-GGACATCATCCCTTTCGGCA-3′ Rev: 5′-TGGGGTAGACGTGGATGTCA-3′ |
This paper | N/A |
RT-PCR primers for Sqle Fwd: 5′-AGTGAACAAACGAGGCGTCC-3′ Rev: 5′-AGCAAGCTTTTCGGAGCTGA-3′ |
This paper | N/A |
RT-PCR primers for Tert nuclear DNA | West et al., 2015 | N/A |
RT-PCR primers for mtDNA D loop | West et al., 2015 | N/A |
Recombinant DNA | ||
MSCV-IRES-Thy1.1 | Addgene | Plasmid ID: 17442 |
Software and Algorithms | ||
FlowJo v10 | FlowJo, LLC | N/A |
Prism 6 | GraphPad Software | N/A |
Other |