Table 11.

Comparative analysis between inter-simple sequence repeat and start codon targeted polymorphic markers

Parameters	Markers
	ISSR	SCoT
No of clusters from dendrogam	5	5
No of clusters from PCA	5	5
Mean major allele frequency	0.3778	0.3148
No. of observations	18	18
Total no of alleles	32	52
Mean no of alleles	9.4000	11.1667
Mean gene diversity	0.7358	0.8158
Mean PIC	0.7192	0.8009
Allele count range	1–15	1–10
Allele frequency range	0.0556–0.8333	0.0556–0.5556
Total No of polymorphic loci	70	80
Range of % polymorphic loci	94.44–100.00	94.44–100.00
Range of effective alleles, Ne	1.2887–1.7831(0.1797–0.2944)	1.7416–1.9181(0.0776–0.2426)
Nei’s genetic diversity, H	0.2112–0.4335(0.0600–0.1371)	0.4111–0.4778(0.0226–0.1168)
Shannon’s information index, I	0.3583–0.6237(0.0639–0.1759)	0.5911–0.6706(0.0233–0.1604)
Total gene diversity, Ht	0.3817–0.4957	0.4686–0.4958
Gene diversity in population Hs	0.2551–0.3482	0.4344–0.46800
Coeff of gene differentiation Gst	0.2049–0.3180	0543–0.0735
Level of gene flow, Nm	1.2497–3.5193	9.3067–419.6100

PIC Polymorphic information content, Standard deviations are in parentheses