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. 2017 Nov 14;8:816. doi: 10.3389/fphar.2017.00816

Table 1.

TdP classifiers based on in-vitro ion channel assays.

Feature In-silico model Classification References NTotal NCorrect
TDP+ TDP−
IC50,hERGEFTPC NA Feature < 30 Feature > 30 Redfern et al., 2003 52 NA
APD90 Ventricular myocyte models of rabbit, rat and human LDA Mirams et al., 2011 31 30
-log(IC50,hERGIC50,CaV) NA LR Kramer et al., 2013 55 50
1+a0BPCaV+a1BPNa,fast1+a2BPhERG NA LR Mistry et al., 2015 31 from
(Mirams et al., 2011)
55 from
(Kramer et al., 2013)
28
TDR Human ventricular myocyte model TDR profiles Christophe, 2015 55 from
(Kramer et al., 2013)
NA
CDrug,ArrhythmiaEFTPC 3D FEM model of human heart Feature < 200 Feature > 200 Okada et al., 2015 12 12
EADs Human ventricular myocyte model Waveform appearance Abbasi et al., 2017 12 from
(Okada et al., 2015)
11
APD50 & Diastolic Ca2+ Human ventricular myocyte models SVM and PCA Lancaster and Sobie, 2016 86 from
(Kramer et al., 2013) and
(Mirams et al., 2011)
75
AUCINaL,drugAUCINaL,control +AUCICaV,drugAUCICaV,control Human ventricular myocyte model LDA Li et al., 2017 12 12

LDA, Linear Determinant Analysis; LR, Logistic Regression; SVM, Support Vector Machine; PCA, Principal Component Analysis; Cdrug,EAD, concentration of the drug that produces EAD; BPx, % block of the x (x = Na, fast, CaV, hERG) ion channels; TDR, transmural dispersion of repolarization; Cdrug,Arrhythmia, concentration of the drug that produces arrhythmia in the model; EAD, early after depolarizations; AUCIx,drug/control, area under the curve of the x (x = CaV, NaL) current transient at steady state action potential in the presence (drug) or absence of the drug (control). Table also lists the number of compounds analyzed in the study (NTotal) and the number of correctly classified compounds (Ncorrect).