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. 2017 Nov 14;8:1957. doi: 10.3389/fpls.2017.01957

Table 4.

Nucleotide diversity in examined regions of pea and M. truncatula LysM-RLK genes.

Gene Part Length. bp Segr. sites HHe π*103 πs*103 πa*103 πas
PsK1 Overall 633 56 0.874 21.57 49.11 13.64 0.278
Upstream LysM1 105 11 0.748 19.20 46.52 11.39 0.245
LysM1 159 19 0.815 42.04 71.36 33.30 0.467
Int. LysM1-2 42 2 0.346 8.33 0.00 10.40
LysM2 141 11 0.830 22.71 68.46 9.16 0.134
Int. LysM2-3 54 4 0.058 1.45 0.00 1.87
LysM3 126 8 0.874 10.33 37.37 2.76 0.074
PsSym37 Overall 633 39 0.862 18.39 52.62 8.46 0.161
Upstream LysM1 105 6 0.788 11.14 53.13 0.27 0.005
LysM1 159 9 0.777 20.30 29.28 17.66 0.603
Int. LysM1-2 42 2 0.320 7.81 37.72 0.00 0.000
LysM2 141 10 0.675 19.39 59.87 6.72 0.112
Int. LysM2-3 54 4 0.455 26.30 104.13 3.96 0.038
LysM3 126 8 0.483 21.88 59.32 10.98 0.185
PsLykX Overall 636 42 0.841 15.60 29.52 11.65 0.395
Upstream LysM1 105 10 0.753 22.48 24.36 21.97 0.902
LysM1 165 12 0.709 14.94 13.02 15.50 1.190
Int. LysM1-2 42 1 0.313 7.44 37.51 0.00 0.000
LysM2 141 10 0.802 20.70 42.42 14.06 0.331
Int. LysM2-3 54 0 0.000 0.00 0.00 0.00
LysM3 126 9 0.780 15.32 52.02 5.11 0.098
MtLYK2 Overall 639 65 0.915 12.74 30.38 7.69 0.253
Upstream LysM1 105 9 0.439 14.25 28.52 10.46 0.367
LysM1 165 16 0.729 14.16 27.32 10.49 0.384
Int. LysM1-2 42 1 0.051 1.22 5.70 0.00 0.000
LysM2 141 21 0.329 12.80 27.97 8.24 0.295
Int. LysM2-3 54 3 0.163 4.24 5.99 3.77 0.629
LysM3 126 15 0.816 17.50 58.75 5.69 0.097
MtLYK3 Overall 636 63 0.976 11.46 13.41 10.89 0.812
Upstream LysM1 105 9 0.447 6.20 13.04 4.25 0.326
LysM1 162 28 0.899 17.73 5.17 21.45 4.149
Int. LysM1-2 42 0 0.000 0.00 0.00 0.00
LysM2 141 9 0.744 22.13 40.14 16.84 0.420
Int. LysM2-3 54 5 0.089 2.18 2.28 2.15 0.943
LysM3 126 11 0.281 3.55 4.15 3.38 0.814
MtLYK4 Overall 639 47 0.971 12.21 12.26 12.19 0.994
Upstream LysM1 105 5 0.391 5.71 2.57 6.61 2.572
LysM1 162 13 0.562 10.91 1.58 13.78 8.722
Int. LysM1-2 42 0 0.000 0.00 0.00 0.00
LysM2 141 12 0.712 22.40 35.32 18.60 0.527
Int. LysM2-3 54 3 0.564 12.23 0.00 15.57
LysM3 126 13 0.697 10.30 18.61 8.01 0.430

πa/πs ratio higher than 1 is indicated in bold.