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. 2017 Nov 20;8:1610. doi: 10.1038/s41467-017-01732-9

Table 1.

Split tracr fragments sequences

Split tracr fragment Sequence. RNA in lowercase and DNA in uppercase DNA/RNA Design principal
tracr5′ RNA caaaacagcauagcaaguuaaaauaaggcuaguccguuaucaacuugccuaguggcc
tracr5′ hyb v1 CAAAACAGCATAGCAAguuAaAATAAGGCTAgTCCguuaTCaACTTGCCTAGTGGCC 47/10 Structure-guided design
tracr5′ hyb v2 caaaacagcauagcAAguuAaAATAAGGCTAgTCCguuaTCaACTTGCCTAGTGGCC 33/24 5′-anti-repeat as RNA
tracr5′ hyb v3 CAAAACAGCATAGCaaguuaaaauaaggcuaguccguuaucaacuugccuaguggcc 14/43 Stem loop 1 & 2 as RNA
tracr5′ hyb v4 CAAAACAGCATAGCaaguuaaaauaaggcuaguccguuaucaaCTTGCCTAGTGGCC 28/29 Stem loop 1 as RNA
tracr5′ hyb v5 CAAAACAGCATAGCaaguuaaaATAAGGCTaguccguuaucaacuugccuaguggcc 22/35 ½ stem loop 1 and all stem loop 2 as RNA
tracr5′ hyb v6 CAAAACAGCATAGCAAguuaaaauaaggcuaguccguuaucaaCTTGCCTAGTGGCC 30/27 Scanning modification of v4
tracr5′ hyb v7 CAAAACAGCATAGCaaguuaaaaTAAGGCuaguccguuaucaaCTTGCCTAGTGGCC 34/23
tracr5′ hyb v8 CAAAACAGCATAGCaaguuaaaauaaggcTAguccguuaucaaCTTGCCTAGTGGCC 30/27
tracr5′ hyb v9 CAAAACAGCATAGCaaguuaaaauaaggcuagTCCguuaucaaCTTGCCTAGTGGCC 31/26
tracr5′ hyb v10 CAAAACAGCATAGCaaguuaaaauaaggcuaguccguuaTCaaCTTGCCTAGTGGCC 30/27
tracr3′ RNA ggccactaggcaagtggcaccgagtcggtgcuuuuu
tracr3′ hyb GGCCACTAGGCAAgTgGCACCgAGTCGGTGcTTTTT 36/4
tracr3′ DNA GGCCACTAGGCAAGTGGCACCGAGTCGGTGCTTTTT 40/0
tracrHyb.2 GTTGGAACCATTCAAAACAGCATAGCaaguuaaaauaaggcuaguccguuaucaaCTTGAAAAAgTgGCACCgAGTCGGTGcTTTTT 54/33