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. 2017 Nov 15;8:1891. doi: 10.3389/fpls.2017.01891

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Copyright © 2017 Guerra-García, Suárez-Atilano, Mastretta-Yanes, Delgado-Salinas and Piñero.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Overall phylogenetic relationship among 242 individuals of P. coccineus from Mexico. Numbers and colors represents the eight main genetic clusters solved by Admixture: (1) Wild-SUR-CH, (2) Wild-TMVB, (3) Wild-striatus, (4) Wild-SMOCC, (5) Cult-SUR-CH, (6) Cult-OV, (7) Cult-TMVB and (8) Cult-SMOCC. Please refer to text to understand what acronyms stands for. (A) Maximum-Likelihood tree, main doted clades indicated support bootstrap values >75%. Black dot next to cluster 8 indicates the Blanco Tlaxcala breeding line; dark triangle shows the Spanish population; feral samples are indicated with an asterisk. (B) Individual assignment based on 42,548 SNP’s solved with Admixture. (C) Rooted Neighbor-Net topology achieved by SplitsTree.