Table 1. Sequencing statistics of seven coral holobiont viral communities.
Sequencing statistics of DNA and RNA viromes associated with coral holobiont communities of seven Great Barrier Reef coral species.
Host species | Template | Accession number (Bioproject # PRJNA302344) | #raw reads | #contigs | N50 | Longest contig | #predicted genes |
---|---|---|---|---|---|---|---|
Acropora tenuis | DNA | SAMN02709831 | 1,620,989 | 4,268 | 1,530 | 13,669 | 10,679 |
Fungia fungites | DNA | SAMN04272222 | 1,605,748 | 778 | 1,365 | 7,098 | 1,779 |
Goniastria aspera | DNA | SAMN04274802 | 1,170,146 | 15,173 | 1,614 | 48,259 | 44,198 |
Galaxea fascicularis | DNA | SAMN04274801 | 1,869,983 | 989 | 1,501 | 5,386 | 1,512 |
Pocillopora acuta | DNA | SAMN04277425 | 2,213,465 | 18,029 | 1,615 | 40,341 | 33,726 |
Pocillopora damicornis | DNA | SAMN02709826 | 2,659,198 | 2,188 | 1,617 | 20,529 | 5,651 |
Pocillopora verrucosa | DNA | SAMN04277423 | 9,328,233 | 10,351 | 1,594 | 67,301 | 29,381 |
Seawater | DNA | SAMN06849075 | 320,701 | 1,006 | 1,491 | 18,804 | 3,116 |
Acropora tenuis | RNA | SAMN02709832 | 853,227 | 1,517 | 731 | 5,386 | 1,499 |
Fungia fungites | RNA | SAMN04274763 | 1,323,170 | 354 | 693 | 1,597 | 377 |
Goneastrea aspera | RNA | SAMN04274806 | 1,337,144 | 3,953 | 727 | 5,693 | 5,144 |
Galaxea fascicularis | RNA | SAMN04277306 | 1,796,476 | 934 | 679 | 5,386 | 921 |
Pocillopora acuta | RNA | SAMN04277426 | 1,445,938 | 3,761 | 928 | 7,499 | 4,389 |
Pocillopora verrucosa | RNA | SAMN04277424 | 2,928,367 | 67 | 739 | 1,462 | 106 |
Seawater | RNA | SAMN06849076 | 667,528 | 60 | 699 | 1,795 | 102 |