Skip to main content
. 2017 Nov 20;7:15873. doi: 10.1038/s41598-017-16221-8

Table 2.

Sense/antisense amino acid (aa) types for overlapping codons, F = −2 reading frame.

Amino acid classes produced by sense:antisense nucleotides
nucleotide 2 or 2′
U C A G
nt 1 = U L, F ∈ Φ S ∈ π Y ∈ Φ, stop C, W, stop
nt 1′ = A I, M ∈ Φ T ∈ φ N, K ∈ Π S, R
nt 1 = C L ∈ Φ P ∈ φ H, Q ∈ Π R ∈ Π
nt 1′ = G V ∈ φ A ∈ φ D, E ∈ Π G ∈ π
Sense:antisense nucleotides needed to produce pairs of aa classes
sense class antisense (1′2′3′) aa class
Φ φ Π π
L, NP = Φ U1U2:A1′U2′ U1U2:A1′C2′ U1U2:A1′A2′ A1U2:U1′C2′
S, NP = φ C1C2:G1′U2′ G1U2:C1′A2′ G1C2:G1′G2′
L, P = Π G1A2:C1′A2′ C1A2;G1′G2′
S, P = π ambiguous → A1G2:U1′C2′

The relation between the sense/antisense overlapping codons and the nucleotide numbers are defined in Fig. 6.