Table 4.
Identification of plasmid-encoded proteins in secreted and surface sheared fractions of two C. acnes strains.
| Strain | Fraction | Locus ID (in p09-9) | Annotation | MW | Score | Significant matches | Coverage (%) | Unique peptides |
|---|---|---|---|---|---|---|---|---|
| 11-79 | Secretome | APS60_12543 | PT repeat protein, partial FlhF domain (type II specific) | 62.5 | 577 | 15 | 20.8 | 11 |
| 11-79 | Secretome | APS60_12625 | Hypothetical protein, signal peptide | 30.7 | 520 | 12 | 27 | 6 |
| 11-79 | Secretome | APS60_12535 | L,D-peptidoglycan transpeptidase domain protein (type II specific) | 34.5 | 200 | 6 | 20.5 | 5 |
| 11-79 | Secretome | APS60_12600 | TadE family protein (TadE2) | 12.9 | 119 | 2 | 26.4 | 2 |
| 11-79 | Sheared | APS60_12625 | Hypothetical protein, signal peptide | 30.7 | 1009 | 19 | 39.2 | 8 |
| 11-79 | Sheared | APS60_12543 | PT repeat protein, partial FlhF domain (type II specific) | 62.5 | 823 | 22 | 19.6 | 12 |
| 11-79 | Sheared | APS60_12600 | TadE family protein (TadE2) | 12.9 | 242 | 4 | 26.4 | 2 |
| 11-79 | Sheared | APS60_12535 | L,D-peptidoglycan transpeptidase domain protein (type II specific) | 34.5 | 145 | 6 | 14.4 | 4 |
| 09-9 | Secretome | APS60_12625 | Hypothetical protein, signal peptide | 30.7 | 455 | 12 | 27 | 6 |
| 09-9 | Secretome | APS60_12600 | TadE family protein (TadE2) | 12.9 | 213 | 4 | 44.8 | 3 |
| 09-9 | Sheared | APS60_12625 | Hypothetical protein, signal peptide | 30.7 | 895 | 21 | 47.8 | 9 |
| 09-9 | Sheared | APS60_12600 | TadE family protein (TadE2) | 12.9 | 593 | 11 | 44.8 | 3 |