. 2017 Nov 16;8:1981. doi: 10.3389/fpls.2017.01981

Table 3.

Differentially expressed genes (FDR, p ≤ 0.01) in the resistant M. sieversii PI613981 (MS) and the susceptible “Royal Gala” (RG) parental lines at time 0 and at 6, 24, and 48 hpi (samples wounded and infected with P. expansum, denoted as “P”) that mapped to the qM–Pe3.1 QTL on LG3.

	Description	log₂(RG0/MS0)	log₂(MS6P/MS0)	log₂ (MS24P/MS0)	log₂ (MS48P/MS0)	log₂ (RG6P/RG0)	log₂ (RG24P/RG0)	log₂ (RG48P/RG0)
MDP0000133552		−3.2	1.6	1.4	0.9	0.6	3.2	2.0
MDP0000134935	Homogentisate 1,2-dioxygenase	−0.5	−1.3	−0.7	−0.5	−0.7	−1.5	−2.5
MDP0000182835		+	2.1	–	−0.8	NaN	+	+
MDP0000194902	E3 ubiquitin-protein ligase RMA1H1	−1.8	−1.4	−0.8	−0.4	−0.9	−0.8	0.0
MDP0000194903	Thioredoxin M4, chloroplastic	−2.3	−1.9	−0.6	−0.3	−0.4	0.2	−2.6
MDP0000237909	Cytochrome c oxidase copper chaperone	0.9	0.1	−0.1	−2.5	−0.6	−2.4	−3.8
MDP0000243585	Metallothionein-like protein type 3	−5.8	−1.1	−1.4	−0.1	−0.7	−0.4	−0.2
MDP0000271115	Lectin–domain containing receptor kinase A4.2	+	–	−1.7	−0.6	+	+	+
MDP0000285282	Monoglyceride lipase	−1.3	−1.2	−0.5	0.0	−0.1	0.6	0.7
MDP0000301516	Probable ubiquitin–conjugating enzyme E2 26	0.7	−0.6	−0.5	−0.4	−0.6	−1.3	−2.0
MDP0000324718	Ethylene-responsive transcription factor 4	−2.7	−0.7	−2.2	−1.7	−0.8	−2.0	−1.1
MDP0000357502		+	−0.1	−0.9	−0.6	+	+	+
MDP0000367430		+	4.5	4.6	3.4	+	+	+
MDP0000368270		+	–	–	–	NaN	+	+
MDP0000407067	Secologanin synthase	+	6.0	5.3	5.6	+	+	+
MDP0000473430	Threonine synthase 1, chloroplastic	+	–	0.5	–	NaN	+	+
MDP0000573244	Probable protein phosphatase 2C 39	0.7	0.3	−0.2	−0.3	−0.4	−2.3	−2.4
MDP0000902023	Lectin–domain containing receptor kinase A4.3	+	–	–	–	NaN	+	+
MDP0000915514		−2.4	3.1	3.9	1.7	–	3.6	4.0
MDP0000921179	Uncharacterized basic helix–loop–helix protein At1g06150	−4.4	−1.7	0.7	0.9	1.4	5.6	4.2

The symbol “+” indicates no expression in the denominator, “–“ indicates no expression in the numerator, “NaN” indicates no expression detected in any of the samples.