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. 2017 Nov 21;18:887. doi: 10.1186/s12864-017-4283-4

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 10 — Phylogenetic, genetic distance, and recombination analysis of VZV. a Maximum likelihood tree of VZV genomic sequences generated using RAxML, with CeHV-9 as an outgroup. Bootstrap values over 65% are shown. A Phylogenetic network (b) was produced using Splitstree (kimura 2-parameter, gamma = 0.50800, and p-inverse = 0.19700). There are seven clades A-G, and the overall genetic distance (Mega 6, pairwise deletion) was 0.136%. Viral strains in panels a and b are colored according to country of origin (Panel a)