Table 1.
Single-Marker Family-Based Association Analysis of IFIH1 Markers
dbSNP ID (137) | Exon/Intron | cDNA Change | Amino Acid Change | MAF | Familya (n) | Zb | P Valueb |
---|---|---|---|---|---|---|---|
rs35744605 | Exon 10 | c.1879G>T | p.Glu627Ter | 0.0034 | 36 | -0.792 | 0.43 |
rs72650663 | Exon 11 | c.2105C>T | p.Thr702Ile | 0.0029 | 26 | -0.854 | 0.39 |
rs3747517 | Exon 13 | c.2528A>Gc | p.His843Arg | 0.27(A) | 1592 | -3.925(A) | 0.000087 |
rs35667974 | Exon 14 | c.2767A>G | p.Ile923Val | 0.0087 | 84 | -2.902 | 0.0037 |
rs35732034 | Intron 14 | c.2807+1G>A | -- | 0.0061 | 66 | -1.300 | 0.19 |
rs1990760 | Exon 15 | c.2836G>Ad | p.Ala946Thr | 0.41(G) | 1755 | -4.369(G) | 0.000012 |
Abbreviations are as follows: MAF, minor allele frequency; n, number.
Variant locations are based on reference gene accessions NM_022168.2 and NP_071451.2.
T1D sibpair/trio families collected by the Type 1 Diabetes Genetics Consortium.
Z scores and p values were calculated for the minor alleles.
A is the minor allele, which is opposite to dbSNP
G is the minor allele, which is opposite to dbSNP