Table 2.
Primer information.
CODE | Sequence 5′-3′ | Tm (°C) | Amplicon (bp) | Gene target | Phylogenetic target |
---|---|---|---|---|---|
567F | GGC GTA AAG CGC ATG CAG GT | 61.4 | 114 | 16S rRNA (Thompson et al., 2004) | Vibrio spp. |
680R | GAA ATT CTA CCC CCC TCT ACA G | 54.3 | |||
Vc pyrH F | CAA CTG GGC AGA CGC AAT CCG TGA GT | 64.8 | 166 | pyrH (this study) | V. coralliilyticus |
Vc pyrH R | CGT AAA TAC GCC ATC AAC TTT TGT C | 54.9 | |||
Vh pyrH F | CTT GCA ACG GTA ATG AAC GGT TTG GCA | 61.9 | 171 | pyrH (this study) | V. harveyi |
Vh pyrH R | AGT ACC TGC AGA GAA GAT TAC CAC T | 57.1 |