Skip to main content
. 2017 Nov 21;7:15975. doi: 10.1038/s41598-017-16186-8

Table 3.

Compositional features of the major genomic islands (GIs) of discrepancies observed between the genotypes O2T60C and S2T10D/S11T3E.

Genomes GIs Size (kb) CDS Coordinates* Overall functions
O2T60C 1 26.9 BBA85_00118 - BBA85_00148 Molybdopterin cofactor biosynthesis, iron transport, nitrite extrusion, kinase/response regulator system
2 16.3 BBA85_01811 - BBA85_01827 Inositol uptake/metabolism and regulatory system, Galactilol PTS system
3 13.1 BBA85_00355 - BBA85_00367 Galactilol PTS system
4 8.2 BBA85_00391 - BBA85_00399 Rhamnose uptake/metabolism and regulatory system
5 2.0 BBA85_02270 - BBA85_02472 Iron transport
S2T10D* S11T3E 6 9.1 BBF95_00141 - BBF95_00152 Conserved plantaricin operon
7 7.9 BBF95_02519 - BBF95_02524 Type I restriction-modification system
8 7.6 BBF95_00632 - BBF95_00638 EPS and CPS biosynthesis
9 4.9 BBF95_01179 - BBF95_01183 EPS and CPS biosynthesis
10 3.3 BBF95_01848 - BBF95_01846 Membrane proteins
11 2.0 BBF95_02607 - BBF95_02609 Membrane proteins

Complete list of genes harbored exclusively in the two genotypes are reported in Supplementary Tables 2 and 3.

*CDS coordinates are referred to O2T60C and S2T10D.