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. 2017 Nov 8;6:1972. [Version 1] doi: 10.12688/f1000research.12867.1

Table 1. Summary of genomic features of assembled genomes comparing IDBA-UD output to scaffolded genome after Redundans processing and the P. cinnamomi Rans isolate genome.

DU054 WA94.26
IDBA-UD Redundans IDBA-UD Redundans
Assembly
size (Mb)
71.29 62.80 76.95 68.07
No. scaffolds 33,475 14,268 36,333 10,084
N50 (bp) 4,085 9,951 4,075 20,813
No. predicted
genes
NA 23,414 NA 22,573