Table 2.
Variant | ATP | Tm1b (°C) | Tm2b (°C) |
---|---|---|---|
WT | 0 | 44.4 ± 0.2 | None |
F86L | 0 | 30.9 ± 0.9 | 55.1 ± 0.9 |
E258A | 0 | (47.8 ± 1.8)c | (N.A.)c |
WT | 2 mM | N.A. | 59.4 ± 0.9 |
F86L | 2 mM | N.A. | 54.7 ± 0.1 |
E258A | 2 mM | N.A. | 56.5 ± 0.7 |
Tm values were estimated from curve fits of thermofluor data in Figure 4, as described in Materials and Methods. N.A. – not applicable.
The low temperature transition observed with WT RAD51 in the absence of ATP is referred to as Tm1, and the high-temperature transition observed in the presence of ATP is referred to as Tm2. The low and high temperature transitions observed with RAD51 variants under various conditions are categorized as Tm1 or Tm2 based on an arbitrary cutoff of 50°C.
The melting curve for E258A in the absence of ATP likely includes two transitions, but these were poorly resolved (Fig. 4). The reported value of Tm1 represents the overall midpoint of the melting curve, which may be considered a composite or average of the different transitions.