Table 1.
Top Upstream Regulators and Molecular and Cellular Functions of Gene Expression Changes in GSH-Deficient Lenses.
LEGSKO Epithelia | BSO-Treated LEGSKO Epithelia | LEGSKO Fiber Cells | BSO-Treated LEGSKO Fiber Cells |
---|---|---|---|
Upstream Regulators (p-value) | |||
| |||
HSF4(5.32E-09) | HSF4(2.84E-10) | STIM1(4.23E-05) | HSF4(1.98E-08) |
MAF(2.76E-06) | MAF(1.52E-07) | FGF1(5.56E-05) | MAF(2.31E-07) |
GLUL(3.47E-06) | ANGPT2(7.22E-04) | NRF2(1.14E-04) | MAP2K1/2(1.67E-06) |
MKNK1(3.89E-05) | ORC4(9.44E-04) | SOD1(2.79E-04) | GNA12(1.67E-06) |
BDNF(2.84E-04) | ORC3(9.44E-04) | SQSTM1(3.60E-04) | APP(1.78E-06) |
| |||
Molecular and Cellular Functions (p-value range) | |||
| |||
Amino Acid Metabolism (1.82E-02 – 9.84E-06) | Cell Morphology (4.35E-02 – 7.47E-04) | Carbohydrate Metabolism (1.60E-02 – 2.42E-06) | Post-Translational Modification (4.93E-09 - 4.93E-09) |
Post-Translational Modification (5.50E-03 – 9.84E-06) | Cellular Assembly and Organization (4.35E-02 – 8.47E-04) | Small Molecule Biochemistry (4.71E-02 – 2.42E-06) | Protein Degradation (4.93E-09 - 4.93E-09) |
Small Molecule Biochemistry (4.67E-02 – 9.84E-06) | Cellular Compromise (3.99E-02 – 8.47E-04) | Vitamin and Mineral Metabolism (4.60E-03 – 2.42E-06) | Free Radical Scavenging (7.75E-03 – 9.15E-07) |
Cellular Assembly and Organization (3.96E-02 – 5.50E-04) | Cellular Development (4.49E-02 – 8.47E-04) | Drug Metabolism (9.19E-03 – 4.28E-06) | DNA Replication, Recombination, and Repair (7.75E-03 – 3.79E-06) |
Cellular Function and Maintenance (4.14E-02 – 5.50E-04) | Cellular Function and Maintenance (4.49E-02 – 8.47E-04) | Protein Synthesis (9.19E-03 – 4.28E-06) | Cell Morphology (1.03E-02 – 5.15E-06) |