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. 2017 Nov 22;9:59. doi: 10.1186/s13321-017-0246-7

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© The Author(s) 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — The accuracy distribution in terms of RMSD (a) and the energy difference ( $Δ E = E_{after} - E_{before}$ ) distribution (b) of the peptide models before and after minimization with AMBER for the peptides with 10 amino acids