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. 2017 Nov 23;7:16198. doi: 10.1038/s41598-017-16417-y

Table 6.

Diversification test using diversity-dependent diversification decoupled (DDD) models using genus specific initial net diversification rate, initial extinction rate and carrying capacity parameter.

Package Function IST Model Arion Geomalacus AIC Δ AIC
r 0 μ 0 K r 0 μ 0 K
DDD dd_KI_ML yes r 0A, r 0G, μ 0A, μ 0G, KA, KG 0.61 0.021 22.982 0.823 2.00E-05 9.009 129.72 4.88
DDD dd_KI_ML yes r 0A, r 0G, KA, KG 0.538 23.217 0.828 8.988 125.93 1.08
DDD dd_KI_ML yes r 0 A  ≈r 0 G, K A, K G 0.616 22.952 0.616 9.003 124.84 0.00
DDD dd_KI_ML yes r 0A, r 0G, KA ≈ KG 0.229 56.12 1.902 56.12 186.47 61.62
DDD dd_KI_ML yes r 0A, r 0G, KA ≈ Inf, KG ≈ Inf 0.169 Inf 0.125 Inf 148.72 23.87
DDD dd_KI_ML yes r 0A ≈ r 0G, KA ≈ Inf, KG ≈ Inf 0.154 Inf 0.154 Inf 147.17 22.33

Bold identifies the best-fit model. AIC’s and the difference in AIC’s with the best model (∆AIC) are shown. IST, incomplete sampling taxa; r 0A (=λ 0A − μ0A), initial net diversification rate for Arion; r 0G (=λ 0G − μ0G), initial net diversification rate for Geomalacus; μ 0A, the initial extinction rate in Arion; μ 0G, the initial extinction rate in Geomalacus; μ 0, the initial extinction rate when applicable; KA, carrying capacity parameter for Arion; KG, carrying capacity parameter for Geomalacus; r 0 (= λ 0 − μ0), initial net diversification rate; ‡ the parameter in the model is fixed to zero.