Table 6.
Correlation between the number of GO terms at different levels and homogeneity in terms of BP, CC, MF and pathway. PCC is the Pearson Correlation Coefficient between percentage of proteins annotated by r GO terms and homogeneity and p-value is the significance level.
| Number of proteins annotated by (participated in) r GO terms(pathways) | PCC(p-value) | ||||
|---|---|---|---|---|---|
| BP | CC | MF | pathway | ||
| BGLL | 1 | 0.41(3.25E-07) | 0.31(1.34E-04) | 0.30(2.44E-04) | 0.76(2.59E-28) |
| 2 | 0.25(2.33E-03) | 0.13(1.16E-01) | 0.36(1.04E-05) | 0.35(1.69E-05) | |
| 3 | 0.14(1.01E-01) | 0.01(9.21E-01) | 0.21(1.19E-02) | 0.24(3.81E-03) | |
| 4 | 0.09(2.94E-01) | 0.10(2.22E-01) | −0.02(7.88E-01) | 0.04(6.57E-01) | |
| >=5 | −0.09(2.80E-01) | −8.24E-04(9.92E-01) | −0.05(5.62E-01) | 0.27(9.30E-04) | |
| IBGLL | 1 | 0.25(8.95E-06) | 0.15(7.34E-03) | 0.09(1.18E-01) | 0.58(5.65E-30) |
| 2 | 0.05(3.34E-01) | 0.12(4.16E-02) | 0.10(7.17E-02) | 0.27(8.23E-07) | |
| 3 | 0.15(8.49E-03) | 0.05(3.37E-01) | 0.04(5.19E-01) | 0.16(5.22E-03) | |
| 4 | 0.04(5.20E-01) | 0.03(5.90E-01) | 0.05(3.95E-01) | 0.07(2.21E-01) | |
| >=5 | −0.21(1.68E-04) | −0.12(3.09E-02) | −0.04(4.57E-01) | 0.10(9.22E-02) | |
| RAK | 1 | 0.42(2.07E-10) | 0.15(3.02E-02) | 0.30(7.73E-06) | 0.81(9.07E-50) |
| 2 | 0.24(3.62E-04) | 0.15(3.27E-02) | 0.22(1.31E-03) | 0.29(1.96E-05) | |
| 3 | 0.14(3.88E-02) | 0.07(3.20E-01) | 0.21(2.07E-03) | 0.22(1.30E-03) | |
| 4 | 0.14(4.43E-02) | 0.11(1.05E-01) | 0.09(1.82E-01) | 0.26(1.50E-04) | |
| >=5 | 0.003(9.67E-01) | 0.10(1.61E-01) | 0.07(3.41E-01) | 0.24(3.27E-04) | |
| NS | 1 | 0.60(7.61E-07) | 0.37(4.10E-03) | 0.55(9.51E-06) | 0.82(4.83E-15) |
| 2 | 0.30(2.22E-02) | 0.27(3.99E-02) | 0.39(2.66E-03) | 0.01(9.62E-01) | |
| 3 | 0.18(1.93E-01) | 0.04(7.86E-01) | 0.25(6.12E-02) | 0.01(9.61E-01) | |
| 4 | 0.09(5.13E-01) | 0.17(2.02E-01) | −0.04(7.63E-01) | 0.40(1.94E-03) | |
| >=5 | 0.03(8.29E-01) | 0.05(7.30E-01) | 0.01(9.50E-01) | 0.41(1.71E-03) | |
| WT | 1 | 0.27(4.90E-09) | 0.11(1.70E-02) | 0.31(8.91E-12) | 0.81(8.46E-107) |
| 2 | 0.18(7.31E-05) | 0.10(2.98E-02) | 0.18(1.32E-04) | 0.37(2.44E-16) | |
| 3 | 0.05(2.93E-01) | 0.07(1.15E-01) | 0.09(4.84E-02) | 0.21(6.72E-06) | |
| 4 | 0.09(5.68E-02) | 0.09(6.30E-02) | 0.07(1.40E-01) | 0.16(6.86E-04) | |
| >=5 | 0.004(9.38E-01) | 0.04(3.75E-01) | 0.02(7.32E-01) | 0.13(3.72E-03) | |
| LC | 1 | −0.09(3.15E-22) | −0.19(9.22E-91) | −0.06(2.97E-10) | 0.31(1.98E-256) |
| 2 | −0.03(4.66E-04) | −0.11(4.94E-30) | 0.03(2.33E-04) | 0.13(9.62E-43) | |
| 3 | −0.04(1.80E-05) | 0.02(1.23E-02) | 0.05(3.28E-07) | 0.07(1.55E-12) | |
| 4 | 0.04(1.67E-05) | 0.06(3.89E-09) | 0.07(7.85E-14) | 0.08(5.69E-19) | |
| >=5 | 0.12(1.37E-39) | 0.19(1.41E-90) | 0.10(2.28E-24) | 0.07(7.26E-14) | |
| CO | 1 | 0.16(1.68E-08) | 0.11(4.83E-05) | 0.06(2.49E-02) | 0.49(1.64E-76) |
| 2 | 0.06(2E-02) | 0.03(2.2E-02) | 0.13(2.69E-06) | 0.28(3.71E-24) | |
| 3 | 0.05(6E-02) | 0.02(4.01E-02) | 0.10(2.00E-03) | 0.17(4.28E-09) | |
| 4 | 0.01(6.46E-02) | 0.04(2.08E-02) | −0.02(4.22E-01) | 0.10(2.93E-04) | |
| >=5 | −0.08(3.87E-03) | -0.08(6.47E-03) | −0.04(1.22E-01) | 0.14(1.01E-06) | |