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. 2017 Nov 24;8:1779. doi: 10.1038/s41467-017-01856-y

Table 1.

CSI 2.0 secondary structure prediction based on experimental chemical shifts for CA–SP1(T8I) NL4-3, CA(A92E)–SP1 NL4-3, and CA–SP1 HXB2

Subdomain Residue CA–SP1(T8I) NL4-3 CA(A92E)–SP1 NL4-3 CA–SP1 HXB2
CA V221 C C C
G222 C C C
G223 C C C
P224 C -- --
G225 C -- --
H226 H C C
K227 H C C
A228 H C --
R229 H C C
V230 H H --
L231 H H C
SP1 A1 H H H
E2 H H H
A3 H C H
M4 H C --
S5 H C --
Q6 H C --
V7 C -- --
I8/T8 C C C
N9 C C --
P10 C -- --
A11 C C C
T12 C C --
I13 C C --
M14 C C --

Designations C-coil and H-helix are as described in the Methods section. TALOS-N75 secondary structure predictions and predictions for additional CA and CA–SP1 constructs are provided in the Supplementary Tables 2, 3. “--” indicates predictions that are less reliable due to missing chemical shifts