Table 1.

Minimum, maximum and mean deregressed breeding value (deregBV) and genomic inflation factor lambda and number of individuals included in GWAS per trait

Trait	Min deregBV	Max deregBV	Mean (sd) deregBV	Genomic inflation factor (Lambda)	Number of individuals
NRH	−75.08	64.28	0.90 (15.68)	0.983	2506
NRC	−58.99	46.41	1.22 (14.67)	0.994	3615
IFLH	−62.74	50.40	−0.17 (15.34)	0.976	1484
IFLC	−52.94	46.50	−1.39 (13.75)	0.990	4122
DFS	−61.88	41.91	−2.69 (12.52)	0.990	3619
CEd	−210.01	121.45	−3.37 (17.93)	0.974	4975
CEd_sc	−210.01	121.45	−4.32 (17.36)	0.992	4159
SBd	−114.71	291.12	−13.00 (27.54)	1.010	1610
GLd	−121.55	156.02	0.39 (18.26)	0.935	2753
BWd	−110.60	209.64	−0.59 (19.69)	0.948	2561
CEm	−122.15	107.57	1.09 (25.09)	0.990	2862
SBm	−187.92	180.70	−8.84 (28.73)	1.005	1136
GLm	−113.34	132.43	−1.78 (23.51)	0.981	2756
BWm	−92.46	97.23	0.82 (18.92)	0.978	2683
SBd corr	−114.71	291.12	−14.28 (27.80)	1.014	1496
SBm corr	−187.92	180.70	−8.58 (29.66)	1.003	1051

Trait: NRH non-return rate in heifers, NRC non-return rate in cows, IFLH interval from first to last insemination in heifers, IFLC interval from first to last insemination in cows, DFS Days to first service, CEd calving ease direct, CEd_sc calving ease direct with stature deregressed breeding value (deregBV) as covariate, SBd stillbirth direct, GLd gestation length direct, BWd birth weight direct, CEm calving ease maternal, SBm stillbirth maternal, GLd gestation length maternal, BWd birth weight maternal, SBd corr Stillbirth direct, excluding the smaller cluster, SBm corr, Stillbirth maternal, excluding the smaller cluster

SNPs: number of SNPs considered for GWAS after filtering

Min deregBV: Minimum deregressed breeding value for the trait

Max deregBV: Maximum deregressed breeding value for the trait

Mean (sd) deregBV: Mean and standard deviation of the deregressed breeding value for the trait