Table 7.
DEGs obtained between high sugar bottom (HSB) vs low sugar bottom (LSB) internode samples using three databases SoGI, SUGIT and SAS. Shown here are some of the sucrose/sugar related transcripts
| Feature ID | Description | Fold change (original values) | FDR < 0.01 |
|---|---|---|---|
| SoGI-DGE | |||
| CA255667 | Sucrose synthase 2 | −28.85 | 0.01 |
| CA207180 | Sucrose transporter 2 | −18.14 | 5.53E-03 |
| CA267680 | Sugar-phosphate isomerase-like protein | −17.31 | 4.84E-03 |
| TC112923 | Sugar-starvation induced protein | −15.38 | 7.76E-03 |
| TC121981 | Sucrose synthase 3 | −8.42 | 1.88E-04 |
| TC146639 | UDP-sugar pyrophosphorylase | −8.39 | 3.65E-04 |
| TC113610 | Sucrose phosphate phosphatase | −8.29 | 1.66E-03 |
| CA072415 | Sucrose non-fermenting related protein kinase | −7.5 | 3.33E-05 |
| CA258700 | Possible sugar transferase | −6.69 | 1.04E-04 |
| TC140141 | Impaired sucrose induction 1-like protein | −6.53 | 4.84E-04 |
| CA233504 | Sugar phosphate exchanger 2 | −6.15 | 1.68E-03 |
| TC131675 | Sucrose phosphate synthase III | −5.74 | 2.64E-06 |
| TC136732 | Sucrose transporter SUT4 | −5.49 | 8.38E-06 |
| TC146044 | Sugar transporter ERD6-like 5 | −5.21 | 3.08E-06 |
| TC129039 | Sugar efflux transporter | −4.92 | 1.24E-04 |
| SUGIT-DGE | |||
| c94324f1p42760 | sugar transporter type 2a | −12.62 | 9.96E-03 |
| c98328f1p02743 | Sucrose synthase 2 | −10.46 | 3.32E-03 |
| c98146f1p0774 | sugar transporter (ERD6) | −9.43 | 1.00E-02 |
| c88771f1p01741 | Bidirectional sugar transporter SWEET | −9.2 | 3.59E-03 |
| c32435f3p21876 | Sucrose non-fermenting related kinase 1b | −8.47 | 8.64E-03 |
| c41415f1p01118 | Sucrose transporter 1 | −6.16 | 6.80E-03 |
| c29857f1p01086 | UDP-sugar pyrophosphorylase | −5.72 | 2.93E-04 |
| c106308f1p04384 | Sucrose phosphate synthase A | −5.33 | 2.54E-04 |
| SAS-DGE | |||
| SCUTFL1058E04.g | sugar phosphatase -like | −7.8 | 6.02E-04 |
| SCEQAM1036A06.g | sucrose-phosphate synthase 3 | −7.47 | 4.37E-06 |
| SCEZAM2031D12.g | UDP-sugar pyrophosphorylase | −7.29 | 2.74E-04 |
| SCEQRT1031C11.g | bidirectional sugar transporter SWEET14-like | −7.17 | 2.06E-03 |
| SCEPAM2014B12.g | sucrose transport SUC3 | −7.08 | 2.03E-05 |
| SCEPCL6023F02.g | sucrose synthase 2 | −6.89 | 2.30E-04 |
| SCBGSD2049G08.g | sugar transport 7 | −6.72 | 8.51E-05 |
| SCAGLR1021A01.g | sugar phosphate phosphate translocator | −6.34 | 9.12E-05 |
| SCCCRT2001F10.g | sucrose non-fermenting 4 | −6.08 | 1.81E-06 |
| SCCCLR1C06G07.g | sucrose-phosphate synthase 1 | −5.63 | 4.97E-06 |
| SCCCRZ1004G04.g | impaired sucrose induction 1 | −5.21 | 7.47E-05 |
| SCEPLR1008A12.g | sucrose transport SUC4-like | −4.81 | 4.82E-06 |
| SCSBST3096E12.g | sucrose-phosphatase 2-like | −5.21 | 3.55E-05 |
SoGI-Saccharum officinarum gene indices; SUGIT-Sugarcane Iso-Seq transcriptome database; SAS-sugarcane assembled sequences