Fig. 4.

Heatmap visualization of annotated edit distance (AED) and GC content of MAKER predicted gene models. a MAKER genes predicted using the high GC HMMs. b MAKER genes predicted using the low GC HMMs. c Novel genes predicted using the high GC HMMs. d Novel genes predicted using the low GC HMMs. e Gene predictions from the high GC HMMs that improved gene predictions made by the standard MAKER protocol. f Gene predictions from the low GC HMMs that improved gene predictions made by the standard MAKER protocol. g Gene predictions from the standard MAKER protocol. h Gene predictions from the MAKER six HMMs annotation