Table 4.
Summary of genetic diversity of Theobroma cacao’s germplasm bank of Corpoica including reference genetic groups (Consense) and without them (Corpoica).
| Analysis | Subpopulations | Na | HOb (Mean ±SD) | HEc (Mean ±SD) | Fd (Mean ±SD) |
|---|---|---|---|---|---|
| Corpoica | Corpoica_1 | 119 | 0.559 (0.042) | 0.338 (0.024) | –0.477 (0.042) |
| Corpoica_2 | 190 | 0.275 (0.014) | 0.329 (0.017) | 0.139 (0.018) | |
| Corpoica_3 | 131 | 0.494 (0.013) | 0.427 (0.008) | –0.149 (0.017) | |
| Corpoica_4 | 59 | 0.040 (0.005) | 0.077 (0.008) | 0.348 (0.042) | |
| Not assigned | 37 | 0.393 (0.018) | 0.402 (0.014) | 0.029 (0.024) | |
| Total_Corpoica | 536 | 0.353 (0.013) | 0.314 (0.009) | –0.030 (0.018) | |
| Consense | Consense_1 | 134 | 0.447 (0.045) | 0.336 (0.024) | –0.213 (0.065) |
| Consense_2 | 307 | 0.226 (0.013) | 0.314 (0.018) | 0.255 (0.025) | |
| Consense_3 | 226 | 0.293 (0.014) | 0.363 (0.014) | 0.196 (0.028) | |
| Consense_4 | 77 | 0.048 (0.008) | 0.055 (0.009) | 0.075 (0.026) | |
| Not assigned | 43 | 0.293 (0.017) | 0.403 (0.013) | 0.267 (0.036) | |
| Total_Consense | 787 | 0.261 (0.012) | 0.294 (0.010) | 0.120 (0.020) |
aNumber of samples, bObserved Heterozygosity, cExpected Heterozygosity, dinbreeding coeficient; SD, standard deviation.