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. 2017 Nov 21;7:476. doi: 10.3389/fcimb.2017.00476

Table 1.

Functional classification of CDSs of unfed and fed A. sculptum ticks.

SG-Unfed SG-Fed (72 h)
Functional class Number of CDSs Number of reads Relative abundance of reads*(%) Number of CDSs Number of reads Relative abundance of reads*(%)
Cytoskeletal 301 1,108,899 3.79 304 907,896 2.23
Detoxification 85 58,478 0.20 92 126,600 0.31
Extracellular matrix/cell adhesion 291 2,025,509 6.93 302 3,084,348 7.58
Immunity 111 105,175 0.36 121 78,672 0.19
Amino acid metabolism 43 61,283 0.21 45 81,064 0.20
Carbohydrate metabolism 131 258,736 0.88 132 364,731 0.90
Energy metabolism 82 290,754 0.99 85 638,711 1.57
Intermediary metabolism 16 18,384 0.06 16 33,194 0.08
Lipid metabolism 183 258,154 0.88 196 305,605 0.75
Nucleotide metabolism 58 94,988 0.32 62 52,976 0.13
Nuclear export 32 310,812 1.06 32 119,450 0.29
Nuclear regulation 205 545,375 1.86 205 366,541 0.90
Protein export machinery 303 1,069,385 3.66 305 884,552 2.17
Protein modification machinery 192 434,173 1.48 197 1,061,107 2.61
Proteasome 176 819,051 2.80 176 505,338 1.24
Protein synthesis 287 8,053,986 27.54 288 4,133,884 10.16
Signal transduction 807 4,422,649 8.28 814 1,532,993 3.76
Storage 18 99,099 0.34 19 97,785 0.24
Transcription factor 131 406,243 1.39 132 222,886 0.55
Transcription machinery 425 2,686,898 9.19 426 1,426,038 3.50
Transporters and channels 381 1,226,355 4.19 397 793,366 1.95
Unknown 680 1,097,518 3.75 769 1,469,774 3.61
Unknown, conserved 1011 2,097,204 7.17 1024 3,759,621 9.24
Putative secreted 2314 3,202,168 10.95 2592 14,865,642 36.53
Transposable elements 544 314,820 1.08 567 961,273 2.36
Viral products 37 179,294 0.61 39 2,818,989 6.93
Total 8844 29,245,390 9337 40,693,036
*

Relative abundance of reads: number of reads within each functional class in one specific sialotranscriptome (unfed ticks or ticks fed for 72 h) / total number of reads in the same sialotranscriptome.