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. 2017 Sep 27;292(47):19328–19337. doi: 10.1074/jbc.M117.812321

Table 1.

Substrate specificity of EcChiP

The on rate (kon) is given by (number of blocking events per second)/[sugar concentration]. In each case sugar concentration = 1.25 μm. The off rate (koff) was obtained from the relationship koff = 1/τc, where τc is the average residence (dwell) time (s) of the sugar molecule in the channel. The equilibrium binding constant is given by the relationship K = kon/koff. N.D. indicates that there were no well-resolved blocking events, so that the residence time could not be evaluated with confidence.

Substrate cis side addition
trans side addition
+100 mV
−100 mV
+100 mV
−100 mV
kon koff K kon koff K kon koff K kon koff K
106m1 s1 s1 m1 106m1 s1 s1 m1 106m1 s1 s1 m1 106m1 s1 s1 m1
GlcNAc2 N.D. N.D. N.D. N.D.
GlcNAc3 N.D. N.D. N.D. N.D.
GlcNAc4 1 2,550 ± 320 390 ± 10 1.7 2,350 ± 255 700 ± 70 3 1,608 ± 25 1,900 ± 350 1 2,642 ± 136 380 ± 50
GlcNAc5 2 250 ± 19 8,000 ± 3,550 4 280 ± 12 14,300 ± 8,300 3 255 ± 3 11,000 ± 1,880 2 385 ± 6 5,200 ± 570
GlcNAc6 4 80 ± 1 50,000 ± 28,700 5 78 ± 1 64,000 ± 39,200 5 93 ± 2 54,000 ± 5,100 2 98 ± 1 20,400 ± 200