TABLE 5.
Contig | Length (kb) | MinION readsa |
Predicted plasmid incompatibility group | AMR genes predicted | |
---|---|---|---|---|---|
No. (%) | Median fold coverage (IQR) | ||||
17 | 207 | 2,414 (5.0) | 18.51 (11.0–25.0) | IncFIB(K)/IncFII(K) | Yes |
14 | 47.9 | 15,053 (31.1) | 564 (366–781) | IncR | Yes |
8 | 43.3 | 10,659 (22.0) | 381 (248–533) | IncX3 | Yes |
Closed, finished MinION assemblies were polished with Illumina reads.