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. 2017 Nov 17;49(11):e396. doi: 10.1038/emm.2017.213

Table 1. Genes differentially expressed in ITGA11-KD cells compared with control cells characterized in the Human Fibrosis PCR Array (RT2 Profiler PCR Array PAHS-0120Z, SABiosciences) and analyzed using the provided RT Profiler PCR Array Data Analysis v. 3.5 software.

Gene symbol Refseq Description Fold regulation
Profibrotic and inflammatory cytokines
ACTA2 NM_001613 Actin, alpha 2, smooth muscle, aorta −1.8557
CCL2 (MCP1) NM_002982 Chemokine (C-C motif) ligand 2 −4.2634
IL-1B NM_000576 Interleukin 1, beta −4.0615
       
Extracellular matrix, ECM remodeling and cell adhesion
COL1A2 NM_000089 Collagen, type I, alpha 2 −2.4318
MMP1 NM_002421 Matrix metallopeptidase 1 (interstitial collagenase) −60.6317
MMP3 NM_002422 Matrix metallopeptidase 3 (stromelysin 1, progelatinase) −5.0002
MMP9 NM_004994 Matrix metallopeptidase 9 (gelatinase B, 92 kDa gelatinase, 92 kDa type IV collagenase) −1.948
TIMP1 NM_003254 TIMP metallopeptidase inhibitor 1 −2.0167
TIMP3 NM_000362 TIMP metallopeptidase inhibitor 3 −2.6427
PLAT NM_000930 Plasminogen activator, tissue −1.9079
PLAU NM_002658 Plasminogen activator, urokinase −3.6351
SERPINE1 NM_000602 Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 −2.2377
ITGA2 NM_002203 Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) −4.8299
       
Signal transduction (TGFβ superfamily and transcription factors)
CEBPB NM_005194 CCAAT/enhancer binding protein (C/EBP), beta −1.9616
STAT1 NM_007315 Signal transducer and activator of transcription 1 −1.8557
TGFBR1 NM_004612 Transforming growth factor, beta receptor 1 −1.9752
TGFBR2 NM_003242 Transforming growth factor, beta receptor 2 −1.948
TGIF1 NM_003244 TGFB-induced factor homeobox 1 −2.0591
THBS1 NM_003246 Thrombospondin 1 3.1123
THBS2 NM_003247 Thrombospondin 2 −1.8947

Bold characters indicate genes upregulated or downregulated by ⩾1.8-fold.