Skip to main content
. 2017 Nov 29;2(6):e00511-17. doi: 10.1128/mSphere.00511-17

TABLE 2 .

Results of demographic inferencea

Model Optimized parameters (SD) Log likelihood P value
(comparison model)
Constant size −562
Instantaneous change ν, 9.9 × 104 (6.0 × 104); τ, 4.4 × 10−2 (4.7 × 10−3) −455 0.0 (constant size)
Exponential change ν, 9.7 × 104 (9.8 × 104); τ, 4.1 × 10−2 (4.9 × 10−3) −455 0.0 (constant size)
Instantaneous change followed by
exponential change
νA, 2.1 × 10−2 (2.9 × 10−2); νB, 1.1 (3.9 × 10−2);
τ, 1.3 × 10−1 (1.6 × 10−1)
−404 1.6 × 10−4
(exponential change)
Two instantaneous size changes νA, 2.9 × 10−2 (1.2 × 10−2); νB, 4.5 × 10−1 (2.1 × 10−1);
τA, 1.2 × 10−1 (3.4 × 10−2); τB, 3.1 × 10−3 (5.3 × 10−3)
−393 4.6 × 10−7
(instantaneous change)
a

ν = Ne/Nancestral; τ = number of generations/Nancestral.