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. 2017 Nov 30;91(24):e01001-17. doi: 10.1128/JVI.01001-17

TABLE 2.

RNA-Seq expression changes in mRNAs of statistical significance (P <0.025) verified by qRT-PCR

Gene Padj NIKS16/NIKS fold change by RNA-Seq NIKS16/NIKS fold change by qPCR W12/NIKS fold change qPCR Gene product/function
DSG1 2.05 × 10−5 −19.95 −4.20 −3.52 Desmoglein 1: calcium-binding desmosome regulator
IL1B 1 −8.68 −5.65 −7.73 Interleukin 1β: inflammatory response regulator
SERPINB3 0.008 −8.40 −4.28 −4.410 Intracellular protease inhibitor, inhibits active inflammatory response
KRT10 0.021 −7.07 −10.26 −3.70 Keratin 10: epithelial cytofilament
KDR 0.025 10.21 10.10 4.30 VEGFR-2, tyrosine kinase receptor
VTCN1 1.4 × 10−9 46.12 8.94 10.56 V-set domain-containing T-cell activation inhibitor-1
AZGP1 2.05 × 10−5 12.64 7.49 8.31 Zinc alpha-2 glycoprotein: lipid metabolism
GAPDH 1 1 1 Glyceraldehyde-3-phosphate dehydrogenase (control)
Beta-actin 1 1 1 Actin (control)