Table 1.
Neuropathological diagnostics and genetic characterization of samples used for patient‐derived xenografts
Xenografts | Histopathological diagnosis | Molecular pathology (methylation score) | Survival (days) | IDH status | 1p/19q Codel | ATRX mutation | CDKN2A/B deletion | RTK amplified | Gain of Chr7 | Loss of Chr10 |
---|---|---|---|---|---|---|---|---|---|---|
E478 | Oligodendroglioma grade III | NA | 73 days | IDH1‐R132Hb | Yesa | NA | Noa | Noa | Yesa | Yesa |
T186 | Anaplastic oligodendroglioma grade III | NA | 107 days | IDH1‐R132Hb | Noa | Yesb (E1473) | Noa | Noa | Noa | Partiala |
T394 | Glioblastoma grade IV | Glioma, IDH mutant, subclass high‐grade astrocytoma (0.99) | 77 days | IDH1‐R132Hb | Partiala | Unclear significanceb , c | Yesa | PDGFRAa | Noa | Partiala |
P3 | Glioblastoma grade IV | NA | 40 days | Nob | Noa | Nob | Yesa | Noa | Yesa | Partiala |
P8 | Glioblastoma grade IV | NA | 58 days | Nob (V178I) | Noa | Unclear significanceb , d | Yesa | EGFRa | Yesa | Yesa |
T434 | Glioblastoma grade IV | Glioblastoma, IDH wild‐type (0.99) | 42 days | Nob | Noa | Nob | Noa | EGFRa | Partiala | Yesa |
NA: not assessed; ATRX E1473: Nonsense mutation, SIFT & Polyphen‐2 score deleterious.
IDH1 V178I – no functional domain affected, 2‐HG unaffected.
Array comparative genomic hybridization.
Targeted next generation sequencing.
ATRX Q891E – hypomorphic mutation, protein features might be affected; additional 15 missense mutations with unclear significance.
ATRX Q891E – hypomorphic mutation, protein features might be affected; additional S502C missense mutation with unclear significance.