Table 1.
Human cell-based gene expression profiles obtained from the GEO database
| Expression set | Model | Virus | MOIa | # Probes | # Sig. hits | % |
|---|---|---|---|---|---|---|
| GSE19392 | HBEC | PR8 (H1N1) | 5 | 22,277 | 546 | 2.5 |
| GSE28166 | Calu-3 | H5N1 | 1 | 41,000 | 1704 | 4.2 |
| GSE31524 | A549 | A/WSN/33 (H1N1) | 4 | 54,675 | 408 | 0.8 |
| subsets | A/duck/Malaysia/F118/08/2004 (H5N2) | 265 | 0.5 | |||
| A/duck/Malaysia/01 (H9N2) | 130 | 0.2 | ||||
| GSE33142 | Calu-3 | A/VN/1203/04 (H5N1) | 1 | 45,015 | 401 | 0.9 |
| GSE36555 | A549 | A/Mex/inDRE4487/2009 (H1N1) | 0.1 | 49,707 | 1756 | 3.5 |
| GSE37571 | Calu-3 | A/CA/04/2009 (H1N1) | 3 | 41,000 | 2144 | 5.2 |
| GSE37951 | A549 | r1918, NS1 Tx/91 (H1N1) | 2 | 41,000 | 11,679 | 28.5 |
| A549 | r1918 (H1N1) | 2 | 41,000 | 16,830 | 41.1 | |
| GSE40844 | Calu-3 | A/CA/04/2009 (H1N1) | 3 | 41,000 | 576 | 1.4 |
| Calu-3 | A/Neth/602/2009 (H1N1) | 3 | 41,000 | 1875 | 4.6 |
a Multiplicity of infection