Table 6.
Significant quantitative trait loci (QTL) statistics and associated marker distances in centi-Morgans (cM).
| QTL | Linkage group | Position (cM) | Peak (LOD) | PSa | Additive effectb | Phenotypic variancec | Flanking marker 1 | Flanking marker 2 | Interval (cM)d |
|---|---|---|---|---|---|---|---|---|---|
| 1 | Cho-15 | 24 | 3.8 | ** | 0.71 | 18.4% | EAGA-MCCG-347 | C4136 | 2.1 |
| 2 | Cho-5 | 138 | 3.0 | ** | 0.42 | 14.6% | C3637 | C1795 | 11.5 |
| 3 | Cho-4 | 78 | 2.6 | * | 0.66 | 12.9% | EAGT-MCCT-273 | UDP98-024-3 | 6.9 |
a
Permutation significance; Significance thresholds were set after 1,000 permutation iterations:
*
Significant at α = 0.05 and
**
Significant at α = 0.01.
b
Additive effect represents the phenotypic score change due to QTL genotypes matching the resistant parent.
c
Phenotypic variance represents the R2-value produced by the QTL.
d
Interval is the genetic distance between the flanking markers in which the QTL resides.