Table 9.
Example of term expansion with embedding vectors trained on different corpora
Term | bioCADDIE |
PMC |
Medline |
|||
---|---|---|---|---|---|---|
Expansion | Score | Expansion | Score | Expansion | Score | |
Cancer | Carcinoma | 0.737 | Carcinoma | 0.674 | Breast | 0.889 |
Cancers | 0.720 | Tumor | 0.616 | Cancers | 0.855 | |
Adenocarcinoma | 0.669 | Cancers | 0.585 | Prostate | 0.801 | |
Malignancies | 0.626 | Tumour | 0.583 | Colorectal | 0.794 | |
Lymphoma | 0.621 | Glioma | 0.559 | Tumor | 0.779 | |
Tumor | 0.616 | Carcinomas | 0.545 | Carcinoma | 0.773 | |
Transplantation | 0.613 | Melanoma | 0.534 | Tumorigenesis | 0.761 | |
Transplant | 0.570 | Tumorigenesis | 0.532 | Tumors | 0.754 | |
Myeloma | 0.563 | Carcinogenesis | 0.530 | Metastasis | 0.745 | |
Carcinogenesis | 0.559 | Glioblastoma | 0.520 | Tumour | 0.733 | |
Human | Bovine | 0.553 | Mammalian | 0.582 | Mouse | 0.756 |
Porcine | 0.542 | Murine | 0.441 | Mammalian | 0.711 | |
Murine | 0.526 | Rat | 0.428 | Also | 0.661 | |
Mouse | 0.518 | Vertebrate | 0.417 | Humans | 0.661 | |
Humans | 0.486 | Preeclamptic | 0.400 | Murine | 0.656 | |
Mammalian | 0.483 | Pompe | 0.396 | Present | 0.650 | |
Rat | 0.483 | Hepa1 | 0.392 | Report | 0.644 | |
Chicken | 0.471 | Chicken | 0.388 | Function | 0.641 | |
Tissue | 0.456 | gpr84 | 0.380 | Functional | 0.632 | |
Cellular | 0.456 | Cyprinid | 0.373 | Well | 0.625 | |
Repair | Closure | 0.515 | Repairthe | 0.597 | Damage | 0.794 |
Metabolism | 0.510 | Replication | 0.570 | Excision | 0.764 | |
Formation | 0.509 | ssbr | 0.543 | Double-strand | 0.727 | |
Grafting | 0.504 | Repairing | 0.540 | Nucleotide-excision | 0.723 | |
Implantation | 0.502 | Damage | 0.516 | Damaged | 0.717 | |
Reconstruction | 0.498 | Regeneration | 0.499 | Breaks | 0.715 | |
Autologous | 0.489 | Healing | 0.498 | mus7 | 0.699 | |
Testing | 0.474 | Detoxification | 0.493 | dsb | 0.697 | |
Mobilization | 0.469 | Resection | 0.489 | Helix-distorting | 0.681 | |
Remodeling | 0.468 | Processing | 0.479 | Post-replication | 0.679 |