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. 2017 Oct 3;45(20):11800–11820. doi: 10.1093/nar/gkx860

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© The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 5. — Read coverage of potential NtcA targets detected by parallel differential profiling. The ChIP-seq and RNA-seq density profiles are shown in blue for NH₄ and in red for −N treatments. Examples of genes included in the NtcA regulon are displayed: NtcA activated (glnA) or repressed (tktA) genes, long transcripts containing ncRNA and downstream protein-coding genes that are transcribed by read-through over the ncRNA terminator (ncl0530-sigD); and genes with internal peaks (metX, glgB and pilA4). Values on the x-axis are the genomic coordinates. Arrows indicate transcriptional start sites (TSS) obtained from Mitschke et al. (46).