Table 2.
Chr | Position | Lead SNP | CA /NCA | Coded allele Frequency | p-value | Interaction Estimate (SE) | Nearest Gene | SNPsa | |||
---|---|---|---|---|---|---|---|---|---|---|---|
Black | Hispanic | White | |||||||||
10 | 44,733,383 | rs1619661 | T/C | 0.81 | 0.92 | 0.91 | 2.55 (0.46) | 22,158 | CXCL12 | 8 | |
22 | 51,065,600 | rs6151412 | G/A | 0.90 | 0.95 | 0.95 | 3.88 (0.79) | 20,921 | ARSA | 1 | |
8 | 83,252,586 | rs10504754 | A/G | 0.74 | 0.47 | 0.43 | 1.54 (0.32) | 22,158 | SNX16 | 1 | |
7 | 48,811,506 | rs13309098 | G/A | 0.88 | 0.88 | 0.93 | 2.37 (0.50) | 22,158 | ABCA13-CDC14C | 4 | |
2 | 213,065,465 | rs6725041 | T/C | 0.78 | 0.44 | 0.48 | 1.52 (0.32) | 22,158 | ERBB4 | 8 | |
20 | 39,435,700 | rs7361259 | T/C | 0.91 | 5.98 (1.39) | 2,169 | MAFB | 1 |
Note: CA, coded allele; CAF, coded allele frequency; Chr, chromosome; NCA, noncoded allele; SE, standard error; SNP, single nucleotide polymorphism.
Total number of significant or sub-threshold SNPs located within the same gene or in LD with the lead SNP ().