Table 1. List of the viruses targeted by the ultrahigh-multiplex assay.
| Family | Genus | Strain / Species |
|---|---|---|
| Arenaviridae | Mammarenavirus | Chapare mammarenavirus* |
| Guanarito mammarenavirus* | ||
| Junin mammarenavirus* | ||
| Lassa mammarenavirus* | ||
| Lujo mammarenavirus* | ||
| Machupo mammarenavirus* | ||
| Pichinde mammarenavirus* | ||
| Sabia mammarenavirus* | ||
| Nairoviridae | Orthonairovirus | Crimean-Congo Hemorrhagic fever virus* |
| Dugbe virus | ||
| Peribunyaviridae | Orthobunyavirus | Oropouche virus |
| Hantaviridae | Orthohantavirus | Dobrava-Belgrade virus* |
| Hantaan virus* | ||
| New York hantavirus | ||
| Puumala virus* | ||
| Saaremaa virus* | ||
| Seoul virus* | ||
| Tula virus | ||
| Phenuiviridae | Phlebovirus | Heartland virus |
| Sandfly fever Sicilian virus | ||
| Severe fever with thrombocytopenia syndrome virus* | ||
| Punta Toro virus | ||
| Rift Valley fever virus* | ||
| Toscana virus | ||
| Uukuniemi virus | ||
| Filoviridae | Cuevavirus | Lloviu cuevavirus* |
| Ebolavirus | Bundibugyo virus* | |
| Reston ebolavirus* | ||
| Sudan ebolavirus* | ||
| Tai Forest ebolavirus* | ||
| Zaire ebolavirus* | ||
| Marburgvirus | Marburg marburgvirus* | |
| Flaviviridae | Flavivirus | Yellow fever virus* |
| Dengue virus 1* | ||
| Dengue virus 2* | ||
| Dengue virus 3* | ||
| Dengue virus 4* | ||
| Kyasanur Forest disease virus* | ||
| Omsk hemorrhagic fever virus* | ||
| West Nile virus | ||
| Hepavivirus | Hepatitis C virus | |
| Hepadnaviridae | Orthohepadnavirus | Hepatitis B virus |
| Hepeviridae | Orthohepevirus | Hepatitis E virus |
| Picornaviridae | Hepatovirus | Hepatitis A virus |
| Rhabdoviridae | Tibrovirus | Bas-Congo virus* |
| Togaviridae | Alphavirus | Barmah Forest virus |
| Chikungunya virus | ||
| Mayaro virus | ||
| O'nyong-nyong virus | ||
| Sindbis virus | ||
| - | Deltaviridae | Hepatitis D virus |
* documented as a confirmed or probable causative agent of VHF in humans