Table 2. Findings of the targeted amplification via the novel panel and real-time nanopore sequencing in patient serum specimens with CCHFV-induced hemorrhagic fever.
# | Origin | Virus identified | Virus load1 | Viral reads | Total reads | Time to first viral read | Processing time2 |
---|---|---|---|---|---|---|---|
1 | Turkey, Ankara | CCHFV-Kelkit06 | 1.96 x 106 | 39 | 3860 | 9 min | 189 min |
2 | Turkey, Ankara | CCHFV-Kelkit06 | 5.20 x 107 | 4 | 1244 | 1 min | 181 min |
3 | Turkey, Ankara | CCHFV-Kelkit06 | 1.90 x 106 | 97 | 8025 | 1 min | 181 min |
1 (ge/ml)
2 includes all specimen processing steps until definitive diagnosis.