Table 6.
Gene product | Locus (BHE19_RS) | F. spartansii T16T | F. psychrophilum JIP02/86 | F. psychrophilum CSF259-93 | F. psychrophilum PG2 | F. beibuense F44-8 | F. daejeonense DSM 17708 | F. columnare ATCC 49512 | F. columnare 94-081 | F. johnsoniae UW101 | F. hibernum DSM 12611 | F. branchiophilum FL-15 | F. denitrificans DSM 15936 | Flavobacterium sp. WG21 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GENE PRODUCTS INVOLVED IN GLIDING | ||||||||||||||
gldA | 02885 | 100 | 77 | 77 | 77 | 77 | 83 | 73 | 73 | 92 | 94 | 77 | 93 | 99 |
gldB | 20835 | 100 | 55 | 55 | 55 | 49 | 65 | 49 | 50 | 88 | 89 | 57 | 88 | 99 |
gldC | 20840 | 100 | 83 | 83 | 83 | 76 | 85 | 79 | 79 | 93 | 96 | 82 | 94 | 100 |
gldD | 02790 | 100 | 59 | 59 | 59 | 57 | 74 | 61 | 61 | 88 | 95 | 70 | 90 | 100 |
gldE | 02795 | 100 | 23 | 23 | 23 | 67 | 80 | 26 | 26 | 90 | 90 | 29 | 88 | 100 |
gldF | 01675 | 100 | 75 | 75 | 75 | 76 | 81 | 68 | 65 | 92 | 93 | 74 | 91 | 99 |
gldG | 01670 | 100 | 61 | 61 | 61 | 63 | 77 | 59 | 58 | 88 | 92 | 61 | 87 | 99 |
gldH | 05785 | 100 | 57 | 57 | 57 | 60 | 77 | 56 | 57 | 93 | 91 | 59 | 92 | 100 |
glaI | 09295 | 100 | 56 | 56 | 56 | 57 | 65 | 53 | 52 | 80 | 84 | 57 | 76 | 99 |
gldJ | 02660 | 100 | 70 | 70 | 70 | 68 | 79 | 69 | 68 | 94 | 96 | 73 | 92 | 100 |
gldK | 21030 | 100 | 76 | 76 | 76 | 77 | 86 | 76 | 76 | 96 | 97 | 80 | 97 | 100 |
gldL | 21035 | 100 | 87 | 87 | 87 | 76 | 83 | 74 | 73 | 94 | 89 | 72 | 96 | 99 |
gldM | 21040 | 100 | 68 | 68 | 68 | 51 | 79 | 65 | 65 | 94 | 86 | 63 | 88 | 100 |
gldN | 21050 | 100 | 64 | 64 | 64 | 50 | 70 | 63 | 62 | 88 | 88 | 61 | 87 | 99 |
GENE PRODUCTS INVOLVED IN SPREADING | ||||||||||||||
sprA | 00945 | 100 | 64 | 64 | 64 | 60 | 72 | 57 | 58 | 88 | 91 | 60 | 88 | 99 |
sprB | 05460 | 100 | 39 | 37 | 39 | 40 | 38 | 33 | 39 | 37 | 37 | 39 | 37 | 98 |
sprC | 05450 | 100 | 36 | 36 | 36 | 34 | 43 | 32 | 34 | 61 | 59 | - | 60 | 99 |
sprD | 05455 | 100 | 43 | 43 | 43 | 35 | 55 | 42 | 39 | 80 | 83 | - | 82 | 99 |
sprE | 05120 | 100 | 49 | 49 | 49 | 47 | 59 | 48 | 47 | 81 | 83 | 45 | 78 | 99 |
sprF | 05455 | 100 | 43 | 43 | 43 | 35 | 55 | 42 | 39 | 80 | 83 | - | 82 | 99 |
sprT | 03165 | 100 | 57 | 57 | 57 | 67 | 77 | 56 | 59 | 88 | 92 | 61 | 87 | 100 |
OTHERS INVOLVED IN T9SS SECRETION | ||||||||||||||
porV | 02670 | 100 | 68 | 68 | 68 | 68 | 71 | 64 | 66 | 87 | 92 | 65 | 83 | 99 |
remA | 22245 | 100 | 40 | 40 | 40 | 42 | 50 | 31 | 41 | 48 | 74 | 36 | 48 | 83 |
The numbers representing amino acid identity (%). “-” indicates that there is no hit output.