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. 2017 Oct 18;174(23):4233–4246. doi: 10.1111/bph.13989

Table 1.

Binding constants and parameters for Drugs A and B. The difference in Gibbs‐free energy between the ground state R and the final R′L state of both drugs is equal, and the corresponding thermodynamic K D (i.e. (k2.k4)/(k1.k3)) is set to 4 × 10−9 M, as in 2016. k1 = 1.106 M−1·min−1 and k2 = 4 min−1 for both; k2 = 64 min−1 for Drug A and 0.24 min−1 for Drug B; k4 = (K D.k1.k3)/k2. The first step is only governed by k1 and k2. The ‘macroscopic’ dissociation rate constant, koff, can be calculated by using Equation 4 or 6 in Figure 1B. The ‘macroscopic’ affinity constant, K D*, represents the concentration of free ligand, [L], at which the occupancy of the target is half maximal at equilibrium and is calculated by using Equation 5 in Figure 1B. As k4 << k3, K D* can be set equal to K D

First step Drug A Drug B
K D* (nM) 4000 4 4
koff (min−1) 4 3.76·10−3 2.35·10−4
k1.K D* (min−1) 4 4.00·10−3 4.00·10−3
k4 (min−1) 6.40·10−2 2.50·10−4